Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2294 ATGGTTCTCAAGACGGAACTTTGCCGTTTTAGTGGGGCCAAGATTTACCCTGGGAAAGGCATCAGATTTGTTCGTGCTGATTCTCAGGTCTTCTTGTTTGCCAACTCAAAATGCAAGAGGTACTTCCACAACAGATTGAAGCCGTCAAAGCTAACCTGGACTGCTATGTACAGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGCCGTGCTACCAAGAAGCCTTACTCTAGGTCTATCGTCGGTGCTACTTTGGAAGTTATACAGAAGAAAAGAACCGAGAAACCTGAGGTTCGTGATGCTGCTAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAGACGAAGGATGAGAAGAAGGCAAAGAAGGCAGAAGTATTGTCCAAGGCCCAAAAAGCACAAAGCAAAGGCAACGTCCCCAAGGGTGCCGCACCCAAAGGTCCTAAACTTGGTGGTGGAGGCGGGAAGCGCTGA 495 0.4828 MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVLSKAQKAQSKGNVPKGAAPKGPKLGGGGGKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2294 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Bisa07g2294 164 MobiDBLite consensus disorder prediction 118 164 - -
Bisa07g2294 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Bisa07g2294 164 PANTHER 60S RIBOSOMAL PROTEIN L24 4 156 IPR000988 -
Bisa07g2294 164 FunFam 60S ribosomal protein L24 3 64 - -
Bisa07g2294 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Bisa07g2294 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Bisa07g2294 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Bisa07g2294 164 SMART 4TRASH 8 46 IPR011017 -
Bisa07g2294 164 Gene3D - 69 148 - -
Bisa07g2294 164 Coils Coil 112 143 - -
Bisa07g2294 164 MobiDBLite consensus disorder prediction 118 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2294 Bisa-ChrBisa07 52496236 52498200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2294 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 86.624 7.81e-90 257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0918 03 12264016 12265984 Bisa07g2294 07 52496236 52498200 CCT
Bisa07g2294 07 52496236 52498200 Bisa07g2294 07 52496236 52498200 ECH