Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2286 ATGACCATTGAACCAAACATAAGCTATATCTTTGTTCTTCTCCTTTTCCTTCCCCGTATAACTCATCACTGTACTTCTCAAAAGACTTGCCCAAACTGTGGCTCCATGCAAGTTCCATATCCTTTAAGCACAGACCCCAAGTGTGGTGATCCATCCTATAGCCTTCATTGTGATCCCAAATCTGAAAAACTCTACTTGGTTACCCTCAAAGGAAGCTCCTACCCCGTTCTCAGAATCATGTCTTCGATGCAGCGCATGGTGGTGCAGCCATCACCTTGGATTCCTGGTTCATGCGTTACTCAAGACATGCCTGTAAGTGAGGGCTTCTGGTTAAACCAGTCACTCCCTTTCAACGTAACTTCATCCAACACAGTCTTCCTCTTTAACTGCTCCCCTCGCCTCTTAGTTTCGCCTCTAAACTGCTCTTCTTCTAGTCTTTGTCACCGTTACTTGGAGAGCTCAGGACATGTTGACGGTAAAAGAGCTTTTCAGTGTGCAAGTGGTCTTGGCCCTTGCTGCTCCTTTATTGCAGGAGGCATGCCTTCAGCTTACAAGATTCGGCTTCACAGGTCTGGATGTAAAGCATTTAGAAGCATCCTTCATTTGGATGTAGGCAAGCCTGCTTATCTGTGGGAGGAAGGTCTTGAAATTCAATGGGCTTCTCCTCCTGAACCAATCTGCAGGACACAACGTGATTGCTTTGGAGCTTCTAACTGTTCCCCTGCTGGTAAAGATGGCGTCTTTCGCTGTCTTTGTAATGGCGGGCACCACTGGAACCCTATTGCTGCAGCATGCTTGAAGAACAAGAAAAAAACCAAGTCACACATCAGTTTGCTGGTCTCAGTAGTGGTTGTTACTTTTTTCTTTCTAGCTTTAGCTCTGGCCATCATCATAAGGAGGTCCTGGAAACTCTCATACCAGTCAAAGCAAGCTAAGGCAATAGAAGATGTCCTCAAGTCAAGCACTGGAGAGAAACCTGCGAGAAATTTTCAACTGAAAGAAGTGATAAAAGCGACAAACGGTTTCTCCAAAGACAGGATTTTGGGGAACGGTGGTTTTGGCGAAGTTTACAGAGGTGAACTTCAAGATGGGACAACGGTGGCTGTGAAGAAAGCTAGATTAGGGAACCTCAAAAGCACCCAGCAAATACTAAACGAGGTTGCTATTCTTTCTCAAGTCAATCACAAGAACCTAGTCAGACTCCTAGGTTGCTGTGTGGAATCGGAGCAGCCTCTGATGATCTATGAGTACATCTCAAATGGAACCCTCCATGACCATCTTCATGGTAGGTTTTCCAACTTCCTAGACTGGAAAACAAGGCTGAAAGTTGCTTTTCAAACTGCTGAAGCATTGGCATATCTTCATTCTGCTGCACACACCCCCATTTACCATAGAGATGTTAAGTCCACAAACATACTGCTAGACGATGATTTCAATGCCAAAGTGGCTGATTTTGGGCTCTCCAGATTGGCTAACCCAGGAATTAGTCACGTTTCAACATGTGCTCAGGGAACTTTAGGCTACTTGGATCCTGAGTACTACCGAAACTACCAGTTAACCGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGCTAGAGCTTTTGACTTCCCAGAAGGCCATAGATTTCACTCGAGAGCAAGATGAAGTCAACCTAGCAATCTTTGTGAGTCAACATGCTAGCAATGGGACAATCATAGAAGTCGTAGACCAGAGGCTTCTGACTTCGATGGAGTCTTCTGGTGATGAAGTGATCACAAGCATAGAACTATTCTCACAGCTTGCAATTAGCTGTCTGAGGGAGAAGAAAAGTGAAAGGCCTAGCATGAAGGATATTGTTCAACACCTTCAATGCATAATTAGGATTGCAGATCAAGTGAGTAATAGTGATCAGGTATCTGTTTAA 1908 0.4444 MTIEPNISYIFVLLLFLPRITHHCTSQKTCPNCGSMQVPYPLSTDPKCGDPSYSLHCDPKSEKLYLVTLKGSSYPVLRIMSSMQRMVVQPSPWIPGSCVTQDMPVSEGFWLNQSLPFNVTSSNTVFLFNCSPRLLVSPLNCSSSSLCHRYLESSGHVDGKRAFQCASGLGPCCSFIAGGMPSAYKIRLHRSGCKAFRSILHLDVGKPAYLWEEGLEIQWASPPEPICRTQRDCFGASNCSPAGKDGVFRCLCNGGHHWNPIAAACLKNKKKTKSHISLLVSVVVVTFFFLALALAIIIRRSWKLSYQSKQAKAIEDVLKSSTGEKPARNFQLKEVIKATNGFSKDRILGNGGFGEVYRGELQDGTTVAVKKARLGNLKSTQQILNEVAILSQVNHKNLVRLLGCCVESEQPLMIYEYISNGTLHDHLHGRFSNFLDWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDDFNAKVADFGLSRLANPGISHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFTREQDEVNLAIFVSQHASNGTIIEVVDQRLLTSMESSGDEVITSIELFSQLAISCLREKKSERPSMKDIVQHLQCIIRIADQVSNSDQVSV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2286 635 SMART serkin_6 342 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2286 635 Gene3D Transferase(Phosphotransferase) domain 1 418 634 - -
Bisa07g2286 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Bisa07g2286 635 Pfam Protein kinase domain 343 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2286 635 Gene3D Phosphorylase Kinase; domain 1 303 417 - -
Bisa07g2286 635 SUPERFAMILY Protein kinase-like (PK-like) 321 618 IPR011009 -
Bisa07g2286 635 CDD STKc_IRAK 348 618 - -
Bisa07g2286 635 FunFam Wall-associated receptor kinase-like 20 418 630 - -
Bisa07g2286 635 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Bisa07g2286 635 Pfam Wall-associated receptor kinase galacturonan-binding 30 88 IPR025287 GO:0030247
Bisa07g2286 635 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 316 417 - -
Bisa07g2286 635 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 621 IPR044652 GO:0004672
Bisa07g2286 635 ProSiteProfiles Protein kinase domain profile. 342 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2286 Bisa-ChrBisa07 52388609 52390516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2286 30 626 Receptor kinase-like Gene Family AT5G02070 46.815 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bisa07g2286 Pkinase 2.9e-50 CL0016