Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2274 ATGAATTATGAGATGCATCTTAAGGAAACAAGAAATATGATGCTTATGAAAGCAGATTTACTCTCTTTTTGTCTCTGTGCCATTCTCACCTTTTCCCTGTGCATCATGATTGCTCTTTATAGCACGCCTCCTTCCTCCACTAGCTCCGTTACCGGTCCTCAAAATAACTTCAACTCGCTCGGTATTTTAAAGAGGATTATAGAGCTTACTGGAGCTGAAGACTTTGTGTCTATACTAAGGAGTGTGGTGACGAGACATCATCTTCTTCAAAGGAATCACAAGGAGGAATGTGACAGCAGAAAATGGGATTCTGATCTCATTTCAAAATACAATGTAAGTCTTGTTTTGACGGTTGGTTTAAAGGATTGTGCCAACTTTAGTACTCTGCAAAAAACAGTGGAAGCTGTTCCTGAATCTAGCCCACAAAGGACACTCATCATTATAGATTCTGGCATATACAGGGAGAAGGTAGTGGTGGAGGCAAACAAAACAAACCTAATAATGCAAGGTCAAGGGTATCTAAACACAGTCATAGAATGGAATGATACTGCGAATTCTACAGGAGGGACTTTCCAAAGTTATTCCGTTGCCATCTTTGCGTCGAAGTTCATTGCTTACAACATCAGCTTTAAGAACACGGCTCCAGCGCCGGCGCCGGGTGAGGTCGGAGCACAGGCAGTGGCACTGAGAGTGAGTGGTGATGAAGCAGCATTCTATGGATGTGGATTCTATGGTGCTCAGGACACCCTCCATGATGACAGTGGCAGACATTATTTCAAAGAATGTTTCATCCAAGGCACCATTGATTTCATTTTTGGAAACGCCAGATCGCTTTATGAGCATGAAGTCCAGAAGAAGGGGGTGTGGATTGATGGAAGTGGCGAAGTGTGGCTTGGAAGAGCTTGGAGACCTTATGCCACTGTCGTCTTCTCAAATACTTCCATGTCTGACGTGGTAGCTCCCGAAGGATGGGCTTCTGACCCCTCCAGTCAAGGGACCGTCTTCTTCGGGGAATACCACTGTTCTGGAGATGGAGCTAACTTTTCATCAAGGGTCCCATACGCGAAGCAACTTACGGACGATGAAGCAGCCCCATTCATGGATGTTTCATACATTGATGGAAACCACACGCCTCCTTCCTCCACTAGCTCCATTACTGGTCCTCAAAATAACTTTAACTCGCTTGGTATTTTAAAGAGGATTATAGAGCCTACGGAAGCTGAAGACTTTGTACCTATAGTAAGAAGTGTGGCGACGAGGTATCATCTTCTTCAAAGGAATCAAAAGGTGGAATGTGATAGCAGAAAATGGGATTCTAATCTCATTTTGAAATACAATGTGAGACTTGTTTTGACGGTTGGTTTAACAGGTTGTACCAACTTCAGTAGTCTGCAAAAAGCAGTGGAAGCTGTTCTTGAATCTAGCCCACAAAGAACACTCATCATTATAGATTCTGGCACATACAGGGAGAAGGTAGTCGTGGAGGCGAACAAAACAACCTTAATATTGCAAGGTCAAGGGTATCTAAACACAGTCATAGAATGGAATGATACTGGGAATTCTACAGAAGGGACTATTAATAGTTATTCCGTTGCCATCTTTGCGTCGAAGTTCATTGCTTACAACATCAGCTTTAGGAACACGGCTCAAGTGGCGGCACCGGGTGAGGCTGGAGCACAGGCAGTGGCACTAAGGGTGAGTGGTGATGAAGCAGCATTCTATGGATGTGGATTCTATGGTGCTCAAGACACCCTCAATGATGACAGTGGCAGACATTATTTCAAAGAATGTTTCATCCAAGGCTCCATTGATTTCATTTTCGGAAACGCCAAATCGCTTTATGAGGATTGCAGCATAAACTCCATAGCAGAAGAAGGGGGTGAGATAGGCGGATGCATCACAGCCCATAGAAGTGAATCGCTGAAGGAGGACACAGGGTTTTCGTTTGTGAATTGCAGGATTGATGGAACTGGGAAAGTGTGGCTTGGAAGAGCTTGGAGACCTTATGCCACTGTCGTCTTCTCAAATACTTACATGTCTGACGTGGTAGCTCCCCAAGGATGGAACGATCAGTCTGACCGCTCCATACAACGGACCGTCTTCTTCGGGGAATACAACTGTCATGGAGGTGGAGCTGACGTTTCATCAAGGGCCTCATATGCGAAGCAACTTAAGGACGATGAAGCAGGCCCATTCATGAAATTTTCATACATTAATGGAAACAAATGGCTTTCACAATCATCCAACATATATGTTACCAGCTGA 2265 0.4442 MNYEMHLKETRNMMLMKADLLSFCLCAILTFSLCIMIALYSTPPSSTSSVTGPQNNFNSLGILKRIIELTGAEDFVSILRSVVTRHHLLQRNHKEECDSRKWDSDLISKYNVSLVLTVGLKDCANFSTLQKTVEAVPESSPQRTLIIIDSGIYREKVVVEANKTNLIMQGQGYLNTVIEWNDTANSTGGTFQSYSVAIFASKFIAYNISFKNTAPAPAPGEVGAQAVALRVSGDEAAFYGCGFYGAQDTLHDDSGRHYFKECFIQGTIDFIFGNARSLYEHEVQKKGVWIDGSGEVWLGRAWRPYATVVFSNTSMSDVVAPEGWASDPSSQGTVFFGEYHCSGDGANFSSRVPYAKQLTDDEAAPFMDVSYIDGNHTPPSSTSSITGPQNNFNSLGILKRIIEPTEAEDFVPIVRSVATRYHLLQRNQKVECDSRKWDSNLILKYNVRLVLTVGLTGCTNFSSLQKAVEAVLESSPQRTLIIIDSGTYREKVVVEANKTTLILQGQGYLNTVIEWNDTGNSTEGTINSYSVAIFASKFIAYNISFRNTAQVAAPGEAGAQAVALRVSGDEAAFYGCGFYGAQDTLNDDSGRHYFKECFIQGSIDFIFGNAKSLYEDCSINSIAEEGGEIGGCITAHRSESLKEDTGFSFVNCRIDGTGKVWLGRAWRPYATVVFSNTYMSDVVAPQGWNDQSDRSIQRTVFFGEYNCHGGGADVSSRASYAKQLKDDEAGPFMKFSYINGNKWLSQSSNIYVTS 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2274 754 SUPERFAMILY Pectin lyase-like 113 379 IPR011050 -
Bisa07g2274 754 ProSitePatterns Pectinesterase signature 2. 264 273 IPR033131 -
Bisa07g2274 754 SUPERFAMILY Pectin lyase-like 448 747 IPR011050 -
Bisa07g2274 754 Pfam Pectinesterase 452 741 IPR000070 GO:0030599|GO:0042545
Bisa07g2274 754 Pfam Pectinesterase 117 279 IPR000070 GO:0030599|GO:0042545
Bisa07g2274 754 Pfam Pectinesterase 295 375 IPR000070 GO:0030599|GO:0042545
Bisa07g2274 754 FunFam Pectinesterase 445 749 - -
Bisa07g2274 754 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 446 745 - -
Bisa07g2274 754 ProSitePatterns Pectinesterase signature 2. 599 608 IPR033131 -
Bisa07g2274 754 Gene3D - 445 753 IPR012334 -
Bisa07g2274 754 Gene3D - 110 386 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2274 Bisa-ChrBisa07 52114432 52140697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2274 451 744 Carbohydrate Esterase AT1G05310 54.698 3.43e-112 344