Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2257 ATGGATCGTGAATGGGGTTCGAAGCCTGGAAGCGGAGGCGCCGCCTCCGCCCAGAACGAAGCCATCGACCGTCGTGAGCGTCTCCGCCGCCTCGCCCTTGAGACTATTGATCTTGCCAAAGACCCCTACTTCATGCGCAATCATCTTGGCAGCTATGAGTGCAAGCTCTGTCTCACTTTACACAACAATGAAGGGAATTACTTGGCGCACACACAGGGTAAGCGGCATCAGACTAATTTGGCTAAGAGAGCAGCTCGCGAGGCCAATGACGCACCTGCTCAACCTCAGCCCCACAAGCGTAAAGTCTCGGTTCGCAAGACAGTGAAGATTGGTAGGCCTGGGTACCGAGTGACCAAGCAATATGATCCAGAGACAAAGCAGAGATCTCTTCTTTTCCAGATTGAATATCCTGAAATTGTAGACATGACAAAGCCGAGGCATCGATTTATGTCTTCTTATGAACAGAGAGTACAACCATTTGATAAAAGATATCAGTATCTCTTGTGTGCAGCTGAACCATATGAAACAATTGCTTTCAAGGTTCCAAGCACAGAGATTGATAAGTCAACTCCAAAGTTCTTCTCACATTGGGACCCAGACTCAAAGATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCGCCAGAGGCAAACAAACCCCAGCCTCCCTCTACAGCCAATGGCACAACTGCACCCGGTGTTTCTCCAAGGCCTCTGCCTCCACCACCCCAAGCTCCACCACCACCTCCTCCTCCACCTCAAGGGTTGCCTCCTGGTGCACCTTTTGGAAATCCTCCTAGAGCCCCTCCACCTCCAATGCCTGGATCATTGCCGTCTCCACCTCCTATGGCAAATGGCCCTCGGCCTGCACCTCCTGGTGGAGTTCCTTCTATCCCACCCCCAACCCCTGTTGCCAGCAGCGCAACAGCGAATTTCAACATGGGTACTAGGCCTCCATCAATGCCACCTGGGCAAGGTTTTCCGGGACAACAAATGCAGGGCCAAGTTGCTCACCCACCACCACCTCCTCCTAGAATGGGGCAGTAG 1047 0.5215 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREANDAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIVDMTKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYETIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPPSTANGTTAPGVSPRPLPPPPQAPPPPPPPPQGLPPGAPFGNPPRAPPPPMPGSLPSPPPMANGPRPAPPGGVPSIPPPTPVASSATANFNMGTRPPSMPPGQGFPGQQMQGQVAHPPPPPPRMGQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2257 348 Pfam Zinc-finger of C2H2 type 52 76 - -
Bisa07g2257 348 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Bisa07g2257 348 PRINTS Proline rich extensin signature 236 252 - -
Bisa07g2257 348 PRINTS Proline rich extensin signature 280 305 - -
Bisa07g2257 348 PRINTS Proline rich extensin signature 211 232 - -
Bisa07g2257 348 PRINTS Proline rich extensin signature 257 274 - -
Bisa07g2257 348 MobiDBLite consensus disorder prediction 304 318 - -
Bisa07g2257 348 Gene3D Classic Zinc Finger 46 88 - -
Bisa07g2257 348 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 344 - -
Bisa07g2257 348 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Bisa07g2257 348 Gene3D - 94 218 - -
Bisa07g2257 348 MobiDBLite consensus disorder prediction 1 21 - -
Bisa07g2257 348 MobiDBLite consensus disorder prediction 213 348 - -
Bisa07g2257 348 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Bisa07g2257 348 MobiDBLite consensus disorder prediction 234 303 - -
Bisa07g2257 348 SMART CactinC_cactus_3 89 217 - -
Bisa07g2257 348 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Bisa07g2257 348 FunFam Splicing factor 3a subunit 2 94 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2257 Bisa-ChrBisa07 51752147 51754605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2257 1 228 C2H2 Transcription Factor Family AT2G32600 88.158 3.12e-140 397