Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2235 ATGGGTAGAGCTCCTTGCTGTGACAAGGCAAACGTAAAGAAAGGGCCATGGTGTCCTGAAGAAGACGCGAAGCTGAAGGAGTATATAGAGAAACATGGAACTGGAGGGAATTGGATTGCTCTCCCACAGAAAGCTGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTTAGATGGCTTAACTATCTCAGACCCAACATTAAGCACGGCGAGTTCTCTGAGGACGAAGACAGGATAATCTGCAACCTCTTTGCTAGCATTGGAAGCAGGTGGTCAATAATAGCAGCTCAGTTACCTGGGAGGACTGACAATGATATCAAGAACTACTGGAACACCAAGCTCAAGAAGAAAATGATGGGCATGAATAGTTCAACTCAGGGGAAGCCTCACCACGCTATACAAAACTCTGCATCATCATATTCTTCATCATCATCCAGAGACAGCACCAACCCTTACTACTACCACCCTCATGTGTCCGTCCAAGGCTCTTCTTCTTCAAGTCTTTTGAGTGGCAACTCTTGTATTTCTGCTGCTAACTCCATTTTTGGAAATAGTAATTTTATGGGACCCATTCAGAACCAGCTAGTGTTAGAAGTGGCAGGGGGTGAGGCTGCTAGTTGTAGCTCTTCTGATGGTAGCAGCAACAATAACCAGATCAGTCATGTCAAAGAAGCAGAGTTAGTGTACGGTGGAGGTGGTGCTCTAGTCCAACAGATAGGTGGATGTAGGTGGACAGAGAAACAAAGTGGATTATGGGGAGACAACCCATTAGATTATGGTCTGGAAGAAATTAAACAGCTGATCATAAGCACTAATAGTTGCAGTAACTTTTTGTTCGATGAAAGCAAGACAGAGGAAAGCGTGGTTTACTTCTGA 873 0.4444 MGRAPCCDKANVKKGPWCPEEDAKLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSEDEDRIICNLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKMMGMNSSTQGKPHHAIQNSASSYSSSSSRDSTNPYYYHPHVSVQGSSSSSLLSGNSCISAANSIFGNSNFMGPIQNQLVLEVAGGEAASCSSSDGSSNNNQISHVKEAELVYGGGGALVQQIGGCRWTEKQSGLWGDNPLDYGLEEIKQLIISTNSCSNFLFDESKTEESVVYF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2235 290 Gene3D - 69 144 - -
Bisa07g2235 290 Gene3D - 7 68 - -
Bisa07g2235 290 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa07g2235 290 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bisa07g2235 290 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bisa07g2235 290 SMART sant 67 115 IPR001005 -
Bisa07g2235 290 SMART sant 13 64 IPR001005 -
Bisa07g2235 290 FunFam Transcription factor RAX3 7 68 - -
Bisa07g2235 290 MobiDBLite consensus disorder prediction 119 143 - -
Bisa07g2235 290 PANTHER OS09G0431300 PROTEIN 1 222 - -
Bisa07g2235 290 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bisa07g2235 290 CDD SANT 16 62 IPR001005 -
Bisa07g2235 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa07g2235 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bisa07g2235 290 FunFam Transcription factor MYB36 70 140 - -
Bisa07g2235 290 CDD SANT 70 113 IPR001005 -
Bisa07g2235 290 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2235 Bisa-ChrBisa07 51367563 51368688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2235 1 119 MYB Transcription Factor Family AT5G57620 88.235 1.49e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa07g2235 Myb_DNA-binding 2.7e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0860 03 11450616 11451927 Bisa07g2235 07 51367563 51368688 CCT