Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2206 ATGGCAACAACCGCTGACGTCAATGTCTCCGGCGAGAACTTCTGCCTGAGCAGTACTGGGGTGGCTTCTTCTGACCCACTCAACTGGGGTGTAGCCGCCGAGTCACTAAAGGGGAGCCACCTGGACGAGGTGAAGCGCATGGTGGCTGAGTATCGGAAGGCGGTGGTGCGCCTTGGTGGGGAGACCCTCACGATCTCGCAGGTGGCCGCCATCTCCGCTCACGACCAAGGCGTCAAAGTGGAGCTCTCGGAGTCGGCCAGGGCCGGCGTTAAGGCCAGCAGTGACTGGGTCATGGACAGCATGGACAAGGGCACCGATAGCTACGGTGTCACCACCGGCTTCGGTGCCACGTCACACAGGCGAACCAAACAAGGTGCTGCTTTGCAGAAAGAGCTTATTAGATTCTTGAACGCTGGCATATTCGGCAACAGCACAGAGTCATGCCACACCCTACCACACTCAGCAACCAGAGCAGCCATGCTGGTGAGAATCAACACTCTCCTCCAAGGATACTCAGGCATTCGATTCGAAATCCTAGAAGCCATCACCAAGCTCCTCAACCACAACATCACCCCATGCTTGCCACTTCGCGGGACTATCACAGCCTCCGGCGACCTCGTCCCTCTTTCTTACATCGCCGCCTTGCTCACCGGCAGACCCAACTCCAAAGCCGTTGGACCCTCCGGTGAAGTCCTTTCTCCCAAGGAAGCCTTCCAATTGGCGGGCATTGATTCCGACTTCTTCGAATTGCAGCCCAAGGAAGGGCTTGCCCTCGTCAACGGCACCGCCGTTGGGTCTGGTTTGGCTTCTATGGTTCTCTTTGAGGCCAACATACTAGCTGTGTTGTCTGAAGTTCTGTCAGCGATTTTCGCAGAAGTGATGCAGGGGAAGCCCGAGTTTACTGATCACTTGACGCATAAGTTGAAGCACCACCCTGGCCAAATCGAGGCTGCTGCTATAATGGAACACATTTTAGACGGAAGCTCTTATGTTAAAGCAGCTCAGAAGTTGCACGAGACTGATCCTCTGCAGAAGCCTAAACAAGATCGTTATGCTCTTCGAACTTCACCCCAGTGGCTTGGTCCCCTGGTTGAAGTAATCAGATTCTCCACAAAGTCAATTGAGAGGGAGATCAACTCTGTAAACGACAACCCTCTGATTGACGTTTCAAGGAATAAGGCCTTGCACGGTGGTAATTTCCAGGGAACCCCAATTGGAGTCTCTATGGACAACACTCGCTTGGCTCTTGCTTCCATTGGCAAACTCATGTTTGCTCAATTTTCTGAGCTGGTCAATGACTTTTACAATAATGGGTTGCCCTCGAATCTCACTGCTAGCAGAAACCCCAGCTTGGACTATGGTTTCAAGGGTGCTGAAATCGCCATGGCATCTTACTGCTCTGAACTTCAATACCTTGCAAACCCAGTCACAAGCCATGTCCAAAGTGCTGAACAGCACAACCAAGACGTGAACTCATTGGGTTTGATTTCATCCAGAAAGACAAACGAAGCTATTGAGATCCTGAAGCTCATGTCTGCCACATTCTTGATTGCACTTTGCCAAGCAATTGACTTGAGGCACCTAGAGGAGAATTTGAAGAACACGGTGAAAAGCAGTGTGAGTCAAGTTGCAAAGAGAACTCTTACCACAGGCGTCAACGGAGAACTCCATCCTTCCAGATTCTGCGAGAAAGATTTGCTGAAAGTGGTTGATAGGGAGTACGTATTTGCCTACATCGATGACCCCACCAGCGCTACATACCCATTGATGCAAAAACTAAGGCAAGTTCTTGTGGATCACGCATTAGCCAATGCTGACACCGAGAAGAACTTGAACACATCCATCTTCCAGAAGATTGCAACTTTTGAGGAGGAGTTGAAGGCTCTGTTGCCAAAGGAGGTTGAAAGTGCGAGAACAGCATACGAGAATGGGAATTCAGCAATTCCAAACAAGATCAAGGAATGCAGGTCTTACCCACTGTACAAGTTTGTGAGAGAGGAGTTGGGAACTGGGTTGCTTACTGGAGAGAAGACCAGGTCACCAGGTGAGGAATGTGAAAAAGTGTTCACAGCTTTGTGTCAGGGCAAGATTATTGATCCTCTTCTGGAATGCCTTGGGGAGTGGAATGGTGCCCCTCTTCCGATATGTTAG 2151 0.5063 MATTADVNVSGENFCLSSTGVASSDPLNWGVAAESLKGSHLDEVKRMVAEYRKAVVRLGGETLTISQVAAISAHDQGVKVELSESARAGVKASSDWVMDSMDKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNSTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAALLTGRPNSKAVGPSGEVLSPKEAFQLAGIDSDFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHETDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSATFLIALCQAIDLRHLEENLKNTVKSSVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPTSATYPLMQKLRQVLVDHALANADTEKNLNTSIFQKIATFEEELKALLPKEVESARTAYENGNSAIPNKIKECRSYPLYKFVREELGTGLLTGEKTRSPGEECEKVFTALCQGKIIDPLLECLGEWNGAPLPIC 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2206 716 PANTHER HISTIDINE AMMONIA-LYASE 19 716 IPR001106 -
Bisa07g2206 716 Gene3D Fumarase/aspartase (Central domain) 263 711 - -
Bisa07g2206 716 FunFam Phenylalanine ammonia-lyase 16 262 - -
Bisa07g2206 716 FunFam Phenylalanine ammonia-lyase 263 570 - -
Bisa07g2206 716 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Bisa07g2206 716 FunFam Phenylalanine ammonia-lyase 529 650 - -
Bisa07g2206 716 NCBIfam phenylalanine ammonia-lyase 25 705 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bisa07g2206 716 SUPERFAMILY L-aspartase-like 25 716 IPR008948 GO:0003824
Bisa07g2206 716 Gene3D - 529 650 IPR023144 -
Bisa07g2206 716 CDD PAL-HAL 61 526 IPR001106 -
Bisa07g2206 716 Pfam Aromatic amino acid lyase 63 533 IPR001106 -
Bisa07g2206 716 Gene3D - 16 262 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2206 Bisa-ChrBisa07 51059396 51062403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2206 6 716 Monolignol Biosynthesis Gene Families AT2G37040 82.841 0.0 1251