Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2203 ATGGCTTCTGGTACATCAAGAATTGTAAGGTTTCAGGATGAGGTTGACACTGAGATGAACGCAAGCAAAGAAAGTCACTTGTCAATGGAGGGCTATAAGATGAATGACAACAAGATGAAGTTGTCGAAGGGAAGAGCACTTTCGAGGGTGTTTTCTGAGGATTATGATGCGAGGGAGAAAGTGGTGTTAGATCCACGAGGACCTAAAGTGAACAAATGGAACAAAATTTTCTTAGTAGCATGTCTGGTCTCTTTATTTGTGGATCCCCTCTTCTTCTACTTGCCTGTGGCTACGAAAGACAAGTGCATTGAAATGTCTCCACCCCTCCAAGTGTCCCTCACTGTAATTCGGTCACTGGTTGATGCATTTTACGTTGTTCAGATTTGTGTTCGGTTTCGAACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTTGGTAGAGGAGAGCTCGTTGTAGACCCTTCCAAGATACAATCCAGGTACCTTCAGAAAGACTTCTGGCTTGATCTTGTGGCAGCCCAGCCTCTTCCAGAGGTGTTAATATGGACTGTGATTCCAAACCTAAAGGGGTCAAAAATGATTGCTTCAAGGCATGTTCTGCCCCTTGTTACCATTTTGCAGTACCTCTTGAGGTTATATCTAATCTTCCCACTATCATCCCAAATCATAAAGGCAAATGGGGTAATGATGGAAAAGGCCTGGGCCGGGGCGGCCTACAATCTTATGCTCTATATGCTGGCAAGTCATGTTTTAGGATCCTGCTGGTACCTCTTGTCAATTGAAAGGCAGGATCAATGTTGGAAGAAAGCTTGCAGTGTTCAGTATCCACAGTGCCACTATTATTATCTTGAGTGTAGAAGCATAGGTGACCCGGACAGGGCAGCTTGGTTCAGAACAAGCAATTTCTCAGGTCAATGTGATCAGAAGGACGCTGGCATTTTTGCTGAAGCTCTCACCTTGGAAATCACGGGTTCAGAGTTCTGCATCAAATTCTATTACTGCCTTTGGTGGGGACTCAGGAATCTCAGCTCTCTGGGACAGAATCTCTTAACAAGTAGTGACGTTGCAGAGATAAATTTTGCTTTGATCATTGCAATTGTTGGCCTAGTGCTTTTTGCCCTGCTTATAGGCAATATGCAAACCTATCTGCAATCCACGACTATGAGGCTGGAAGAATGGAGACTAAGAAGGAGAGACACTGAGAAATGGATGCACCACAGGCAGCTACCTCGTGAGCTGAAGCAAAAAGTGCGACGCTTCGAGCAATTCAGATGGGTTGCCACTCGTGGGGTTGACGAGGAAACCATTCTCAGAGACCTTCCTGCTGATCTCAGACGTGACATCAAACGCCACCTCTGCCTCAACCTCGTCCGACATGTCCCACTATTCGATCACATGGACGAGAGAATGCTAGACGCAATATGCGAGAGATTGAAGCCCTCGCTATGCACTCAAGGGACAAGGCTAGTTCGTGAAGGTGACCCAGTGAATGAGATGCTGTTCATAGTTCGAGGACACTTAGATTCTCACACAACCAACGGTGGTCGAACTGGGTTCTTCAATAGCTGCAGAATAGGGCCAGGTGATTTCTGTGGGGAGGAGCTATTGCCATGGGTTCTGGACCCTCGTCCAAGTGTGGTGCTTCCTTCTTCAACTCGCACAGTGGAAGCCATAGCCCAAGTGGAAGCTTTTGCCCTCATAGCAGAGGACTTACAGTTCGTGGCAGACCAGTTCAGGAGATTACACAGTAAACAGTTGAGACACACTTTCAGGTTTTGTTCTCAGCAATGGAGGACATGGGCTGCTTGCTTCATACAAGCAGCTTGGTTTGCCTATAAGAAAAGAAGAGAGGCCAATGAGCTGAAGAAGAAGCAGAAAGTGGTGGCGCCCTATGTGCCTCCAAGTGATGCTGCCACGGAGTACTTCTCTGCACCTCTGAACCCACGTGTGGGGTCCAGACTTATAGTGTATCCGAACCGAGGTGGGAGCTTGAGATATGGTTCTGAATATGACATTCTCGGTTCCTTAAGGAAGCCTGTTGAACCAGACTTTACTGCGTAA 2058 0.4684 MASGTSRIVRFQDEVDTEMNASKESHLSMEGYKMNDNKMKLSKGRALSRVFSEDYDAREKVVLDPRGPKVNKWNKIFLVACLVSLFVDPLFFYLPVATKDKCIEMSPPLQVSLTVIRSLVDAFYVVQICVRFRTAYVAPSSRVFGRGELVVDPSKIQSRYLQKDFWLDLVAAQPLPEVLIWTVIPNLKGSKMIASRHVLPLVTILQYLLRLYLIFPLSSQIIKANGVMMEKAWAGAAYNLMLYMLASHVLGSCWYLLSIERQDQCWKKACSVQYPQCHYYYLECRSIGDPDRAAWFRTSNFSGQCDQKDAGIFAEALTLEITGSEFCIKFYYCLWWGLRNLSSLGQNLLTSSDVAEINFALIIAIVGLVLFALLIGNMQTYLQSTTMRLEEWRLRRRDTEKWMHHRQLPRELKQKVRRFEQFRWVATRGVDEETILRDLPADLRRDIKRHLCLNLVRHVPLFDHMDERMLDAICERLKPSLCTQGTRLVREGDPVNEMLFIVRGHLDSHTTNGGRTGFFNSCRIGPGDFCGEELLPWVLDPRPSVVLPSSTRTVEAIAQVEAFALIAEDLQFVADQFRRLHSKQLRHTFRFCSQQWRTWAACFIQAAWFAYKKRREANELKKKQKVVAPYVPPSDAATEYFSAPLNPRVGSRLIVYPNRGGSLRYGSEYDILGSLRKPVEPDFTA 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2203 685 ProSiteProfiles cAMP/cGMP binding motif profile. 461 546 IPR000595 -
Bisa07g2203 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 47 633 - -
Bisa07g2203 685 Gene3D Jelly Rolls 459 579 IPR014710 -
Bisa07g2203 685 FunFam Cyclic nucleotide-gated ion channel 1 459 577 - -
Bisa07g2203 685 CDD CAP_ED 461 591 IPR000595 -
Bisa07g2203 685 PRINTS EAG/ELK/ERG potassium channel family signature 356 367 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g2203 685 PRINTS EAG/ELK/ERG potassium channel family signature 128 137 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g2203 685 PRINTS EAG/ELK/ERG potassium channel family signature 424 431 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g2203 685 PRINTS EAG/ELK/ERG potassium channel family signature 330 347 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g2203 685 PRINTS EAG/ELK/ERG potassium channel family signature 374 383 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g2203 685 PRINTS EAG/ELK/ERG potassium channel family signature 245 255 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g2203 685 SUPERFAMILY cAMP-binding domain-like 391 582 IPR018490 -
Bisa07g2203 685 FunFam Cyclic nucleotide-gated ion channel 1 388 452 - -
Bisa07g2203 685 SMART cnmp_10 461 592 IPR000595 -
Bisa07g2203 685 SUPERFAMILY Voltage-gated potassium channels 64 383 - -
Bisa07g2203 685 Gene3D - 76 385 - -
Bisa07g2203 685 Pfam Ion transport protein 73 388 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa07g2203 685 Gene3D Helix hairpin bin 388 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2203 Bisa-ChrBisa07 50990358 50993139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2203 37 685 Ion Channels AT2G28260 64.931 0.0 875