Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2202 ATGGAATCCAAACATTGTGAGATCCGAAGAAAGTGGGAAGAAAGTCAGTTACGGCTTTTGTTCTATTTCTTGTTCTATCTTCCGGCCCCACCTTTTTCTTCTGCGGTAGCAGATACACGACAACGCCGAAGCCTGCTTTTGCCTTACACTACATCTTCTGCTTTGAAGGCCAACTATGGAGGATTCTACTATTTGTTGACATATCCTTCCTCCTTCCATTATGATCAGACCTTCAGGGAAATTCACATGGTTGCAGTGATTTTTTCAGTAACAGAGATGATTACATTTATGGATTCAAACGAAAAATTGAAAGAGGAGGAGAAGTGCTTGGATCCTCAACTATGGCACGCCTGTGCTGGCGGGATGGTGCAAATGCCACCGGTGAACGCTAAGGTCTTTTACTTCCCTCAAGGCCACGCTGAGCATGCATGTGGACATGTGGATTTCAAGACGTGCCCCAGGCTTCCGCTTCCCCCGTACGTTCTATGCAGAGTCGCCTCCCTCAAATACATGGCCGATCCTGAGACAGACGAGGTCTATGCGAAACTTAAGCTTGTTCCCCTGAATGGAATGGAGGCTTTTTATGACGATGATGGTGCTAGAGGAATCATTGGATCTGAAACTCAGGAGAAACTGGCTTCATTTGCAAAGACATTGACGCAATCGGATGCCAACAATGGCGGTGGATTTTCTATTCCTAGATATTGCGCGGAGACTATTTTTCCTCCGTTGGACTTCTCAGCGGATCCTCCTCTTCAATATATAATAGTTAAAGATGTTCATGGGGAATCATGGAAATTCAAACACATTTACAGAGGCACACCGAGGCGGCATCTTTTGACGACTGGATGGAGTCCTTTTGTGAATAAGAAAAAGCTTGTTGCTGGGGATTCGATAGTGTTTTTAAGAGGAGGAAATGGAGATCTCTTCGTCGGGATTCGACGAGCTAAAAGAGGGCATGGAGGTCCATTTGAGTCTTCATCAGTATGGAATCCAGAGGGTGGAAGTCGTGGTCTACCTTTCGGAGGATTTTCGGCCTTCTTGAGGGAGGATGATAAGAAACTACTGACAAATAATGGTAATGGCAATGGAATGATGAGCTCAAGTGGGAGTGTGATGGGTAGCAGGAAAGTGAAGGCTGAAACAGTTATTGAAGCTGCAACTCTTGCAGCCAATGGGCAGCCTTTTGAGGTTATTTACTACCCTCGGGCAAGTACTCCAGAGTTCAGTGTGAAGGCCTCCTTAGTTAGAACTGCACTACAAATTAGGTGGTGTTCTGGACTGAGGTTCAAGATGGCCTTTGAAACAGAGGATTCCTCGCGGATAAGTTGGTTTATGGGAACTGTATCTTCAGTACAGGCTGCTGATCCTGTACTGTGGCCTGATTCACCTTGGAGGCTTCTCCAGGTAACATGGGATGAACCAGATTTACTTCAAAATGTGACACGGGTGAGCCCATGGTTGGTTGAATTGATATCGAACATGCCTGCTATCCCTCCACCTCTCTCACCACCACGGAAGAAACTGAGGTTGCCTCAACATCCAGATTTTCCACTTGATACCCAAATTTATGTGCCAACATTTGCTAGCAACCTCTTAGGTCCCGCCAATAACCGTTTTGGTTATCATCTACCTGAAACAACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTTATTATGGTCTGTCCTTGGCGGATCTCCACCCCAATAAATTGCAGTCAGGTTTATTTCTGACTGGTTTTTCACAGTTTGATCATCATGCTGCTATGCAAACCAAGGTCTCTGATAGCCCAACATTGCAAAATCCCAGCATGAGTGATAATGTATCTTGCTTACTATCCAAGGAAAATTCTGTCCAGTCTTTGAATAAACAGGATGATGTGAAGACACCCCACCTTGTGCTTTTTGGCAAAAAAATTCTTACTGAGAAACAGATGTCTACGAGCTGCTCTCGTGATAGAGTCTCCCCAGTTTTCACTCGAAATAGTTCATCACATGGCAATGATGATAGAGTGACTAATTTTTTTGATGATAACCGCCAAGAAACTGAGGCCAATTTGGAGAAAGGTCACTGTAAAGTTTTTTGGAAGTCTGAAGATTTAGGTCGGATAATGAATCTCTCGTTGCTTGGGTCTTACGACGAACTGTATAGAAAGCTCTCTGACATGTTTGGCATTGAAATATCTGGTGAGATGCTGAACCGCGTGCTTTACCAAGATACAACGGGGGCAGTCAAACACATTGGAGATGAACCATTCAGTGACTTTACGAAAAGAGCTAGGAGATTGACGATTTTAATGGATTCTATCAGTGACAATGTAGGAGCAAGAAGAAGGGATCGTGAGGCAGGATTCCCAACAAATGATAAGACGCCACATGTGGAAGACAATCAGAACAAGCAAGAAATCACCAAACATGGATTTCTTTTCTAA 2433 0.4455 MESKHCEIRRKWEESQLRLLFYFLFYLPAPPFSSAVADTRQRRSLLLPYTTSSALKANYGGFYYLLTYPSSFHYDQTFREIHMVAVIFSVTEMITFMDSNEKLKEEEKCLDPQLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGHVDFKTCPRLPLPPYVLCRVASLKYMADPETDEVYAKLKLVPLNGMEAFYDDDGARGIIGSETQEKLASFAKTLTQSDANNGGGFSIPRYCAETIFPPLDFSADPPLQYIIVKDVHGESWKFKHIYRGTPRRHLLTTGWSPFVNKKKLVAGDSIVFLRGGNGDLFVGIRRAKRGHGGPFESSSVWNPEGGSRGLPFGGFSAFLREDDKKLLTNNGNGNGMMSSSGSVMGSRKVKAETVIEAATLAANGQPFEVIYYPRASTPEFSVKASLVRTALQIRWCSGLRFKMAFETEDSSRISWFMGTVSSVQAADPVLWPDSPWRLLQVTWDEPDLLQNVTRVSPWLVELISNMPAIPPPLSPPRKKLRLPQHPDFPLDTQIYVPTFASNLLGPANNRFGYHLPETTPAGMQGARHAYYGLSLADLHPNKLQSGLFLTGFSQFDHHAAMQTKVSDSPTLQNPSMSDNVSCLLSKENSVQSLNKQDDVKTPHLVLFGKKILTEKQMSTSCSRDRVSPVFTRNSSSHGNDDRVTNFFDDNRQETEANLEKGHCKVFWKSEDLGRIMNLSLLGSYDELYRKLSDMFGIEISGEMLNRVLYQDTTGAVKHIGDEPFSDFTKRARRLTILMDSISDNVGARRRDREAGFPTNDKTPHVEDNQNKQEITKHGFLF 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2202 810 Gene3D - 686 774 - -
Bisa07g2202 810 ProSiteProfiles PB1 domain profile. 689 773 IPR000270 GO:0005515
Bisa07g2202 810 SUPERFAMILY DNA-binding pseudobarrel domain 211 317 IPR015300 -
Bisa07g2202 810 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 106 767 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa07g2202 810 FunFam Auxin response factor 213 317 - -
Bisa07g2202 810 MobiDBLite consensus disorder prediction 652 674 - -
Bisa07g2202 810 MobiDBLite consensus disorder prediction 777 810 - -
Bisa07g2202 810 SMART B3_2 215 317 IPR003340 GO:0003677
Bisa07g2202 810 Pfam Auxin response factor 386 469 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa07g2202 810 Pfam B3 DNA binding domain 215 316 IPR003340 GO:0003677
Bisa07g2202 810 Gene3D - 212 317 IPR015300 -
Bisa07g2202 810 MobiDBLite consensus disorder prediction 777 802 - -
Bisa07g2202 810 ProSiteProfiles B3 DNA-binding domain profile. 215 317 IPR003340 GO:0003677
Bisa07g2202 810 MobiDBLite consensus disorder prediction 652 670 - -
Bisa07g2202 810 Gene3D - 423 496 - -
Bisa07g2202 810 FunFam Auxin response factor 424 497 - -
Bisa07g2202 810 CDD B3_DNA 214 315 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2202 Bisa-ChrBisa07 50907464 50913227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2202 107 774 B3 DNA Binding Superfamily AT4G30080 55.282 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa07g2202 B3 2.6e-22 CL0405