Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2200 ATGTTGGAGTTCATGATGAAATTAATTCTCAATCCCTCCCCTGAACGCCGAGTTTCTTCTTCGTCCGCGTTCTGCATCGCCCACATCTTCAAAACCGTATTCGACTACGCCGCCGCTGCAGAAATGCCACCGAAGTTCGATCCTACCCAGGTTGTCGATGTCTACGTCCGAGTGACGGGTGGTGAGGTCGGTGCTGCGAGTTCACTCGCTCCGAAGATCGGTCCATTGGGTCTTTCTCCTAAGAAAATCGGTGAAGACATTGCCAAAGAGACCGCAAAGGATTGGAAGGGTCTCCGAGTCACTGTGAAGCTCACCGTCCAGAACCGGCAAGCCAAGGTATCGGTGGTGCCCTCCGCCGCTGCATTGGTGATCAAGGCACTAAAGGAGCCCGAAAGAGACCGCAAGAAGACAAAGAACATTAAGCACAATGGTAACATCTCACTCGACGACGTGATCGAGATCGCCAAAATTATGAGGCACAGATCCATGGCCAAGGATTTGAGTGGAACGGTGAAGGAGATTCTCGGTACTTGCGTATCTGTTGGATGTACGGTGGACGGGAAGGACCCCAAGGATCTGCAGCAGGAGATAACTGACGGAGACGTTGAAATTCCTCAAGACTGA 624 0.5192 MLEFMMKLILNPSPERRVSSSSAFCIAHIFKTVFDYAAAAEMPPKFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRHRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPQD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2200 207 ProSitePatterns Ribosomal protein L11 signature. 172 187 IPR020785 GO:0003735|GO:0005840|GO:0006412
Bisa07g2200 207 CDD Ribosomal_L11 54 185 IPR000911 GO:0003735|GO:0005840|GO:0006412
Bisa07g2200 207 Pfam Ribosomal protein L11, RNA binding domain 116 185 IPR020783 GO:0003735|GO:0005840|GO:0006412
Bisa07g2200 207 SUPERFAMILY Ribosomal protein L11, C-terminal domain 117 190 IPR036769 -
Bisa07g2200 207 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 40 128 IPR036796 -
Bisa07g2200 207 Hamap 50S ribosomal protein L11 [rplK]. 50 187 IPR000911 GO:0003735|GO:0005840|GO:0006412
Bisa07g2200 207 Gene3D - 123 205 IPR036769 -
Bisa07g2200 207 SMART rl11c 54 186 IPR000911 GO:0003735|GO:0005840|GO:0006412
Bisa07g2200 207 FunFam 60S ribosomal protein L12 42 122 - -
Bisa07g2200 207 Gene3D - 37 122 IPR036796 -
Bisa07g2200 207 PANTHER 60S RIBOSOMAL PROTEIN L12 42 192 IPR000911 GO:0003735|GO:0005840|GO:0006412
Bisa07g2200 207 FunFam 60S ribosomal protein L12 123 205 - -
Bisa07g2200 207 Pfam Ribosomal protein L11, N-terminal domain 54 110 IPR020784 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2200 Bisa-ChrBisa07 50895921 50897385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2200 42 207 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 89.157 1.43e-107 304