Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2195 ATGAAGATTACTTGTTCTTTTTCTACTTGTTTCTCGCCGTCGGTTAAACACGAAACCCCGCAAGATGGGTCAGGAAGAGAGAATGATGAAACATTTCGTGTTTTCAGTTACAGCGAGTTAAAGTCTGCGACTCGGGGTTTTCATTCCTCGGACAAGGTTGGGGAAGGCGGTTTTGGCTCTGTGTATAAGGGGCGGCTTCGAGATGGGACATTTGTGGCCGTCAAAGTGCTTTCGATTGAGCTGGATTCCATGCGAGGAGAGAAGGAGTTTGTGGCTGAATTGGGTACGCTTGCCGATATCAAGCACGAGAATCTAGTCGTTCTTCGAGGGTGTTGTGTGGAAGGAGCTCACAGATATTTAGTGTACGAGTACATGGAAAACAACAGCCTCTATCACTTCTTCTTAGGTACAAAGGAAAGCAGAATGAGATTCAGCTGGGAATTGAGGAGGGAAGTGTCCATGGGAGTGGCTCGTGGGCTTGCCTATCTGCACGAGGAAATTAAGCCCTATGTTGTGCACAGAGACATCAAAGCCAGAAATATACTTCTTGATCGAGATATGAAGCCAAAGGTTTCAGACTTCGGTTTGGCAAAGTTACTGAGAGACGATAAGTCATACATCAGTACTCAAGTTGCAGGGACACTGGGCTATCTTGCTCCAGAATATACCAATTCTAGACAGGTCACACGAAAATCAGATGTTTATAGCTTTGGAGTATTACTTCTAGAAATTGTGAGTGGCAGAACAGTGGTAGATCCTTATCAAGATACGGATCGTTTCCTGGTGGAGAAGGCGTGGGCAGCGTATGAAGCTAATGAAGTTGTAAAAATGGTGGATGTTGAACTAAATGGGAACTTCCCAGAGGACGAAGCCGTAAGATTCCTGAAGGTGGGGCTGCTTTGCGTGCAAGAAACCGCGAAGCTTAGGCCTCGCATGACAGAGGTTGTTGAAATGTTGAGCAACAGCATCGAAGTGGAAGGTGTTGTTATTTCAAGAGCAGGAGTTGTTAAAGATCTCAGGCACATTAGAACTAAGGACCAACTCTATTCATCACAGGTGTCAAGTTCAAGTGGAGCAACCTATGCACCCTCCTCCTGGAGTGCCAATCTAGCCCGTTAG 1119 0.4602 MKITCSFSTCFSPSVKHETPQDGSGRENDETFRVFSYSELKSATRGFHSSDKVGEGGFGSVYKGRLRDGTFVAVKVLSIELDSMRGEKEFVAELGTLADIKHENLVVLRGCCVEGAHRYLVYEYMENNSLYHFFLGTKESRMRFSWELRREVSMGVARGLAYLHEEIKPYVVHRDIKARNILLDRDMKPKVSDFGLAKLLRDDKSYISTQVAGTLGYLAPEYTNSRQVTRKSDVYSFGVLLLEIVSGRTVVDPYQDTDRFLVEKAWAAYEANEVVKMVDVELNGNFPEDEAVRFLKVGLLCVQETAKLRPRMTEVVEMLSNSIEVEGVVISRAGVVKDLRHIRTKDQLYSSQVSSSSGATYAPSSWSANLAR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2195 372 CDD STKc_IRAK 53 319 - -
Bisa07g2195 372 SMART serkin_6 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2195 372 FunFam Serine/threonine-protein kinase receptor 17 124 - -
Bisa07g2195 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bisa07g2195 372 ProSiteProfiles Protein kinase domain profile. 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2195 372 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 351 - -
Bisa07g2195 372 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Bisa07g2195 372 Pfam Protein tyrosine and serine/threonine kinase 49 319 IPR001245 GO:0004672|GO:0006468
Bisa07g2195 372 SUPERFAMILY Protein kinase-like (PK-like) 30 326 IPR011009 -
Bisa07g2195 372 FunFam Putative LRR receptor-like serine/threonine-protein kinase 125 331 - -
Bisa07g2195 372 Gene3D Phosphorylase Kinase; domain 1 12 124 - -
Bisa07g2195 372 Gene3D Transferase(Phosphotransferase) domain 1 125 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2195 Bisa-ChrBisa07 50863864 50865505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2195 34 351 Receptor kinase-like Gene Family AT1G56120 48.328 1.42e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa07g2195 PK_Tyr_Ser-Thr 8.4e-51 CL0016