Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2194 ATGAAGTTACGTTGTTCTTTTTCAACTTGTTTCTCACCGTCGGTCAAACACCAAACCAGGCAAGATGGGTCAGGAGGACAGAATGATGAAACGTTTCGTGTTTTCAGTTACAGCGAATTAAAGTCTGCGACTCGGGGTTTTCATTCCTCGGACAAGGTTGGGGAAGGCGGGTTTGGCTCTGTGTACAAGGGGCGGCTTCGGGATGGCACATTTGTGGCCGTCAAAGTGCTTTCGATTGAGCTGGATTCCATGCGAGGAGAGAAGGAGTTTGTAGCTGAATTGGGTACGCTTGCCGATATCAAGCACGAGAATCTAGTCGTTCTTCGAGGGTGTTGTGTGGAAGGGGCTCGCAGATATTTAGTGTACGAGTACATGGAAAACAACAGCCTCTACCACTTCTTCTTAGGTACAAAGGAGGGCAGGATGAGATTCAGGTGGGAATTGAGGAGGGATATATCCATAGGAGTGGCTCGTGGGCTTGCCTATCTCCATGAGGAAACTAAGCCCTGTGTTGTGCACAGAGACATCAAAGCCAGAAATATACTTCTTGATCGAGATTTGAAGGCAAAGGTTTCAGACTTTGGTTTGGCCAAGTTACTGAGAGATGAAAAGTCATACGTCAGTACTCAAGTTGCAGGGACATTGGGCTATCTTGCTCCAGATTATGCCAGTTCTGGACAGGTCACACGAAAATCAGATGTTTATAGCTTTGGAGTACTACTCCTAGAAATTGTGAGTGGCAGAACAGTGGTAGATCCTCGTCAGGATGCGGATCGGTTTCTGGTGGAGAAGGTGTGGGCAGCGTATGAAGCAAAAGATCTTGTGAAAATGGTGGATTCTGAGCTAAATGGGGATTTTGTAGAGGAAGAAGCCATAAGATTGCTGAAGGTGGGGCTGCTATGCGTGCAAGAGACGGCGAAGCAGAGGCCTCGCATGACAGAGGTGGTAGAAATGTTGAGGAACAAGATTGAAATGGAAGGTGTTGTGATTTCAAGACCAGGAGTTGTTTCAGATCTCGGGGACATTAGAATTAAGGACTCATTCCCTTCATCACAGGTATCAAGTTCAAGTAGAGCAACCTATGCAACCTCCTCTTGGAGTTCCACCAATCTAGTCCGTTAG 1122 0.4688 MKLRCSFSTCFSPSVKHQTRQDGSGGQNDETFRVFSYSELKSATRGFHSSDKVGEGGFGSVYKGRLRDGTFVAVKVLSIELDSMRGEKEFVAELGTLADIKHENLVVLRGCCVEGARRYLVYEYMENNSLYHFFLGTKEGRMRFRWELRRDISIGVARGLAYLHEETKPCVVHRDIKARNILLDRDLKAKVSDFGLAKLLRDEKSYVSTQVAGTLGYLAPDYASSGQVTRKSDVYSFGVLLLEIVSGRTVVDPRQDADRFLVEKVWAAYEAKDLVKMVDSELNGDFVEEEAIRLLKVGLLCVQETAKQRPRMTEVVEMLRNKIEMEGVVISRPGVVSDLGDIRIKDSFPSSQVSSSSRATYATSSWSSTNLVR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2194 373 SMART serkin_6 47 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2194 373 CDD STKc_IRAK 53 319 - -
Bisa07g2194 373 Pfam Protein tyrosine and serine/threonine kinase 49 319 IPR001245 GO:0004672|GO:0006468
Bisa07g2194 373 Gene3D Phosphorylase Kinase; domain 1 10 124 - -
Bisa07g2194 373 FunFam Putative LRR receptor-like serine/threonine-protein kinase 125 331 - -
Bisa07g2194 373 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 364 - -
Bisa07g2194 373 Gene3D Transferase(Phosphotransferase) domain 1 125 330 - -
Bisa07g2194 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bisa07g2194 373 ProSiteProfiles Protein kinase domain profile. 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2194 373 FunFam Serine/threonine-protein kinase receptor 17 124 - -
Bisa07g2194 373 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Bisa07g2194 373 SUPERFAMILY Protein kinase-like (PK-like) 30 319 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2194 Bisa-ChrBisa07 50831900 50833554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2194 35 362 Receptor kinase-like Gene Family AT1G53430 46.809 8.47e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa07g2194 PK_Tyr_Ser-Thr 5e-50 CL0016