Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2192 ATGGGTAACATAGGAAGTAGCGGCGTTAACAATAACCGTCGTAGACACAGTAGCAGTGTCAGAAGGACTCATCCGCCACCGCCTCCACCGGTGACACCACAGCCTGAAATCACGGCCAACCGATTCGTCTATGCTGCCGCTACACCATACCCATCACAATTTCCAAATCCAAATCCTCCACCATATTATCAGTACCCAGGTTACTATCCCCCACCACCACCAACGATGCCGGTGCCTCTGCCAACTCCATACGATCAACACCATCGTATGGGGTCTCAGCCACCGATGGACCCGGCATGGGTTGGTGGACGTTATCCTTGTGGCCCAGTTATGCCTCCGCCTGCACCCTATGTGGAGCATCAGAAGGCGGTTACCATAAGGAACGATGTTAACATCAAGAAGGAGACTTTGAGGGTTGAGCCGGATGAGGAAAACCCTGGGCGGTTCCTTGTGGCTTTCACATATGATGCCACTGTTGCTGGGAGCATCACCATACTTTTCTTTGCAAAAGAAGGTGATGGCTGCATCCTTACACCAATGAAGGAAAATCTTCTAGCACCTGTAACTGTACACTTCCAGCAAGGCCTTGGCCAGAAGTTTAGACAGCCGGTTGGAACTGGTATTGACTTTTCAATATTTGAGGAGTCAGAATTACTGAAGGTAGGTGACATGGATGTCTATCCTCTAGCAGTGAAGGCAGATGCATCCCCTGGTAATGTTGATGGATCAGATGAAACTCCTGTGCCTGGTGGCTCAAACACTCAGATAACTCAAGCAGTGTTTGAGAAAGAGAAAGGACAGTTCCGGGTGAAGGTGATTAAGCAGATCTTGTGGGTGAATGGAATGAGGTATGAGCTGCAGGAGATATATGGTATTGGAAATTCAGTGGAGAGTGACTTGGATGGAAATGACCCAGGAAAAGAGTGCGTCATCTGCTTGTCAGAGCCGCGGGACACTACTGTGCTTCCCTGCCGACACATGTGCATGTGTAGCGGATGTGCAAAAGTTTTGAGGTTCCAGACAAATAGATGCCCAATTTGCAGACAACCAGTTGAGAGGCTTTTGGAGATAAAGGTCAACAATGGAACTGAGGAATGA 1098 0.4891 MGNIGSSGVNNNRRRHSSSVRRTHPPPPPPVTPQPEITANRFVYAAATPYPSQFPNPNPPPYYQYPGYYPPPPPTMPVPLPTPYDQHHRMGSQPPMDPAWVGGRYPCGPVMPPPAPYVEHQKAVTIRNDVNIKKETLRVEPDEENPGRFLVAFTYDATVAGSITILFFAKEGDGCILTPMKENLLAPVTVHFQQGLGQKFRQPVGTGIDFSIFEESELLKVGDMDVYPLAVKADASPGNVDGSDETPVPGGSNTQITQAVFEKEKGQFRVKVIKQILWVNGMRYELQEIYGIGNSVESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNNGTEE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2192 365 ProSiteProfiles Zinc finger RING-type profile. 309 348 IPR001841 -
Bisa07g2192 365 MobiDBLite consensus disorder prediction 1 38 - -
Bisa07g2192 365 SUPERFAMILY RING/U-box 308 354 - -
Bisa07g2192 365 CDD mRING-HC-C3HC5_MGRN1-like 307 348 IPR045195 -
Bisa07g2192 365 PANTHER MAHOGUNIN 1 360 IPR045194 GO:0061630
Bisa07g2192 365 SMART ring_2 309 347 IPR001841 -
Bisa07g2192 365 Pfam Zinc finger, C3HC4 type (RING finger) 307 353 - -
Bisa07g2192 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 358 IPR013083 -
Bisa07g2192 365 FunFam probable E3 ubiquitin-protein ligase LOG2 293 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2192 Bisa-ChrBisa07 50823810 50827269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2192 36 328 C3H Transcription Factor Family AT3G09770 58.278 1.21e-103 307