Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2187 ATGGTGATGAGGGGGGCGAGTGATGTGCGAGAAGAGAAAGGTAAGGGCCCAAATGGGCCGAGACACAAGGCCTACTTAGGTCGATTTATTGGAGGTCTGGCATCTGCCGGAGGGATGGGGCAGCTGTGCAGGCGTGGTGTTGCTAGGGTTTCTGCATATTGCCTTGGGTTAGCATGTTTTGGGCTCCAGATTGTTTCTCTTTTGGGCCCATTATGCTTTGCTCGATGCTTCTTGGGCTTGTTTTTCCTACATAGGAAGACCACAATGCTTAATCTTCTGGGTTTCTCATCCGCCATGGATGCGGTAGCCTGGAGAGGATTGCTTTACACAATCTTCATTCTGAATTTTGTTTTGGTTTGCCAGCTCATTCTCCTTCAACCTCTGGTTTCTGCTTTAGAGGGAAAACCTGGAAATGCTGCTGAGTTATTTGAGAGGGTGTCACAAAGTATAAAAGTGAAACAGTATGCTGAGGCACTTGATGATCTCAATGCTGCCATTGGAGCAGATCCAACCCTTTCAGAAGCATACCTTCGCCGTGCAACACTTCTTCGTCAGATATGCAGATATGAGGAATCTGAGAGGAGCTATAAAAAGTTTCTGGAGTTGAAACCTGGCAATTCAGCAGCAGAAAAGGAGCTCTCGCAGTTGTTGCAGGCTCAAAGTGCTCTAGAAACAGCTCAATCACTCTTTGATTCGGGCAAATTTACAAAATCCTTGGAATACATAGACAAAGTTGTACTTGTTTTTTCTCCAGCTTGCTCAAAGGCTAAGCTTCTGAAAGTAACGTTGTTGATAGCTGATAGAGAATATGAGGGTGCCATTGCTGAGTCTGGGTTTATTCTTAAGGACGATGAGAATAATTTAGAGGCATTGTTGCTCCGTGGGCGTGCATACTACTATTTGGCTGATCATGATGTTGCTATGAGGCATTTTCAGAAGGGTCTCCGCCTAGATCCAGAAAACAGTGATCTGAAAAAAGTATATTTTGGATTGAAAAATCTACTAAAAAAGAGTAAAAGTGCGGAAGATAATGTGAGTAAGGGTAAACTTCGTGTGGCAGTAGAAGAATTCAAGGCAGCACTGGCAGTTGATCCTAATCATCTAGCACATAATGTACATCTTCACCTTGGCTTATGTAAAGTACTGGTCAAGCTTGGCAGGGGGAAAGATGCTTTGAACAGCTGTGATGAAGCTCTTAAGATCAATGAGGAACTTACTGAAGCTCTTGTTCAGAGGGGAGAAGCCAAACTTTTAACAGAGGACTGGGAGGGTGCTGTACAAGATCTGAAATCAGCTGCTCAAAAATCTCCTCAGGATATGAATATTCGTGAAGCATTAATGAGGGCTGAGAAAGCTTTAAAGATAAGCAAGCGCAAGGACTACTACAAGATTTTGGGAATTTCAAAAACTGCTTCTGCCTCAGAGATAAAACGCGCCTACAAGAAACTTGCTTTGCAATGGCACCCAGATAAGAATGTCGACAATAGGGAAGAAGCAGAGGCTAAATTCCGAGAAGTTGCTGCCGCATATGAGGTTCTCAGTGATGAAGAGAAACGTACTAGATATGACAGAGGGGAAGACCTCGAAGACATGGGAATGGGCGGGGGAGGGGGAGGTTTCAACCCCTTTGGTGGCGGGGGCCAACAGTTCACCTTTTCGTTTGAAGGAGGCTTCCCTGGTGGCTTTGGTGGGGGCTTTCCGGGCGGATTCGGAGGAGGCTTTCCTGGCGGCGGGGGTGGTGGGTTCGAGTTTCATTTTTGA 1761 0.456 MVMRGASDVREEKGKGPNGPRHKAYLGRFIGGLASAGGMGQLCRRGVARVSAYCLGLACFGLQIVSLLGPLCFARCFLGLFFLHRKTTMLNLLGFSSAMDAVAWRGLLYTIFILNFVLVCQLILLQPLVSALEGKPGNAAELFERVSQSIKVKQYAEALDDLNAAIGADPTLSEAYLRRATLLRQICRYEESERSYKKFLELKPGNSAAEKELSQLLQAQSALETAQSLFDSGKFTKSLEYIDKVVLVFSPACSKAKLLKVTLLIADREYEGAIAESGFILKDDENNLEALLLRGRAYYYLADHDVAMRHFQKGLRLDPENSDLKKVYFGLKNLLKKSKSAEDNVSKGKLRVAVEEFKAALAVDPNHLAHNVHLHLGLCKVLVKLGRGKDALNSCDEALKINEELTEALVQRGEAKLLTEDWEGAVQDLKSAAQKSPQDMNIREALMRAEKALKISKRKDYYKILGISKTASASEIKRAYKKLALQWHPDKNVDNREEAEAKFREVAAAYEVLSDEEKRTRYDRGEDLEDMGMGGGGGGFNPFGGGGQQFTFSFEGGFPGGFGGGFPGGFGGGFPGGGGGGFEFHF 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2187 586 FunFam DnaJ subfamily C member 7 458 569 - -
Bisa07g2187 586 ProSiteProfiles TPR repeat profile. 288 321 IPR019734 GO:0005515
Bisa07g2187 586 ProSitePatterns Nt-dnaJ domain signature. 503 522 IPR018253 -
Bisa07g2187 586 MobiDBLite consensus disorder prediction 1 20 - -
Bisa07g2187 586 SMART tpr_5 372 405 IPR019734 GO:0005515
Bisa07g2187 586 SMART tpr_5 173 206 IPR019734 GO:0005515
Bisa07g2187 586 SMART tpr_5 288 321 IPR019734 GO:0005515
Bisa07g2187 586 SMART tpr_5 406 439 IPR019734 GO:0005515
Bisa07g2187 586 SMART tpr_5 139 172 IPR019734 GO:0005515
Bisa07g2187 586 SMART dnaj_3 459 518 IPR001623 -
Bisa07g2187 586 Coils Coil 206 226 - -
Bisa07g2187 586 ProSiteProfiles TPR repeat region circular profile. 288 321 - -
Bisa07g2187 586 ProSiteProfiles TPR repeat profile. 173 206 IPR019734 GO:0005515
Bisa07g2187 586 MobiDBLite consensus disorder prediction 1 19 - -
Bisa07g2187 586 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 110 586 IPR044620 -
Bisa07g2187 586 CDD DnaJ 460 515 IPR001623 -
Bisa07g2187 586 Gene3D DnaJ domain 458 570 IPR036869 -
Bisa07g2187 586 Pfam Tetratricopeptide repeat 348 404 - -
Bisa07g2187 586 Pfam DnaJ domain 460 523 IPR001623 -
Bisa07g2187 586 Pfam Tetratricopeptide repeat 152 206 - -
Bisa07g2187 586 PRINTS DnaJ domain signature 462 480 IPR001623 -
Bisa07g2187 586 PRINTS DnaJ domain signature 480 495 IPR001623 -
Bisa07g2187 586 PRINTS DnaJ domain signature 498 518 IPR001623 -
Bisa07g2187 586 PRINTS DnaJ domain signature 518 537 IPR001623 -
Bisa07g2187 586 ProSiteProfiles dnaJ domain profile. 460 526 IPR001623 -
Bisa07g2187 586 FunFam DnaJ domain containing protein 126 457 - -
Bisa07g2187 586 Gene3D Tetratricopeptide repeat domain 126 457 IPR011990 GO:0005515
Bisa07g2187 586 Coils Coil 496 516 - -
Bisa07g2187 586 Pfam Tetratricopeptide repeat 289 321 IPR013105 -
Bisa07g2187 586 SUPERFAMILY Chaperone J-domain 454 565 IPR036869 -
Bisa07g2187 586 SUPERFAMILY TPR-like 131 455 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2187 Bisa-ChrBisa07 50793320 50799968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2187 456 523 C2H2 Transcription Factor Family AT1G74250 47.222 3.52e-11 64.3