Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2186 ATGTCTGGTGACCCCTTTTCCTTATCTTCTTCAATCGGAGGCTTCGCTCCACCACAAAACCCAAGCCCTAACCCTAAACCTATTCCCAAGAAGAAGCGAAACCTTCCAGGAACACCAGATCCAGATGCGGAGGTCATTGCGCTGTCACCGAAAACGCTTATGGCAACGAACAGGTTCATATGTGAGATATGCAACAAAGGGTTTCAGAGAGATCAGAACCTTCAGCTTCACCGGAGGGGTCACAACCTGCCATGGAAGCTACGACAAAGGTCCAACAAAGAGGTGCGAAAGAAGGTCTACATCTGCCCGGAGAAGACATGCGTCCACCATGACCCTGCCAGAGCTCTCGGAGACCTCACCGGCATCAAGAAGCACTTCAGCAGAAAACATGGAGAGAAGAAATGGAAGTGTGACAAGTGCTCCAAGAAATACGCAGTCCAATCTGACTGGAAAGCTCACACCAAAACCTGTGGAACTAGAGAATACAAATGTGATTGTGGTACCCTATTCTCCAGGAAGGACAGCTTCATTACGCACAGGGCTTTCTGTGATGCCTTAGCAGAAGAGAGTGCGAGGCTCACCTCGGTGACTGCTTCAAATCTGAATTTTAACAACGAAGCGGCTGTGAATGTGATAAGCTCACAACCTAGTTTGGGACTTCAAAATAGTAGCACTGTACAAGGAATTTCGCAATTTGGTCCAAATGGGTTTAATTCAGTGGGTGTGGACCAGCAAAGGCCAAGCTTGTCAATGTGGTTGAACCAGGGAAGTAATAATCCACTCGATATGGGAGCTAATTCTGGGCTTTACGTGTCGTCGAGCAATTGTTCTACCGGCTTGCCTGATCACATGGTAGTACAAATGGCCCAAGCTAGTAATAATGACGCTAATTATGGGTCTTGTAATTTTGGAATGCCTGCAGCTTCAAATTCAACAAACGCAGGCCTTTCACTATCTAGTGGGAAAAATGGAGAAGCAGGCGCGAACTTTGCATGCATTTCAAAGCCAGCATCTCCTATGTCAGCCACTGCGCTTCTTCAGAAAGCAGCTCAGATGGGTTCCACCAGAAGCTCTAATAATAATAATAGCCCTGCCATTTTCAGTGGAATCATGACCTCATCTTCTTCCCACTCTACCACTGATCTCAACGACAATAACGCCATGCTGGCGAGGAGTGACAGTAATTTCGGCTCATTCACGCATACGTCAAGTGCTAGTCTTGAGCAGCTTATGATGCAAACAAATGGAAAGCATAGTCATGATCAACAAGTTCAATTGAAGCTATACCCAGCTGGTTCAGAACATAATAATCTTACAAGGGATTTTCTTGGCATGGATGGTGCTACTGCTACAGGAGGAGCTAACCCTCCTCCGTTTCTACCACAAGAGCTCGCTAAGTTCGCTTCCATTGCCTCACCAATGGGTCTGACCCACTTCACTCCCCATCATTGA 1452 0.4683 MSGDPFSLSSSIGGFAPPQNPSPNPKPIPKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLTSVTASNLNFNNEAAVNVISSQPSLGLQNSSTVQGISQFGPNGFNSVGVDQQRPSLSMWLNQGSNNPLDMGANSGLYVSSSNCSTGLPDHMVVQMAQASNNDANYGSCNFGMPAASNSTNAGLSLSSGKNGEAGANFACISKPASPMSATALLQKAAQMGSTRSSNNNNSPAIFSGIMTSSSSHSTTDLNDNNAMLARSDSNFGSFTHTSSASLEQLMMQTNGKHSHDQQVQLKLYPAGSEHNNLTRDFLGMDGATATGGANPPPFLPQELAKFASIASPMGLTHFTPHH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2186 483 MobiDBLite consensus disorder prediction 1 42 - -
Bisa07g2186 483 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 22 451 IPR031140 -
Bisa07g2186 483 MobiDBLite consensus disorder prediction 1 17 - -
Bisa07g2186 483 Gene3D Classic Zinc Finger 37 111 - -
Bisa07g2186 483 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 81 IPR013087 -
Bisa07g2186 483 MobiDBLite consensus disorder prediction 18 32 - -
Bisa07g2186 483 Pfam Zinc-finger double-stranded RNA-binding 59 81 IPR022755 -
Bisa07g2186 483 FunFam protein indeterminate-domain 12-like 38 106 - -
Bisa07g2186 483 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Bisa07g2186 483 MobiDBLite consensus disorder prediction 349 385 - -
Bisa07g2186 483 FunFam protein indeterminate-domain 5, chloroplastic-like 113 192 - -
Bisa07g2186 483 SMART c2h2final6 100 130 IPR013087 -
Bisa07g2186 483 SMART c2h2final6 59 81 IPR013087 -
Bisa07g2186 483 SMART c2h2final6 135 155 IPR013087 -
Bisa07g2186 483 Gene3D Classic Zinc Finger 113 192 - -
Bisa07g2186 483 SUPERFAMILY beta-beta-alpha zinc fingers 58 155 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2186 Bisa-ChrBisa07 50756676 50758565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2186 1 471 IDZ Gene Family AT5G03150 49.143 2.92e-134 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g2186 zf-C2H2_jaz 7e-05 CL0361