Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2168 ATGAGAGTTTCCCCTACTAAGAAGAAGCAGAGACATTCAATCTTACATCACCTATCTGCCTCTTTTGGGTTTCAGTTCAGGAATCAATTTGGGAATGCCAAGAAGATGGGAAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGTCCTGAGTCCAAGAAAAGTGAAGACCAGAAAACAAGTAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGATTTCAGAGTCTTACTTGGAAACTGACAAAGCACCACCACTTCCTCCACCAGAAGATGCTAAATTAACTAATATCGAGAACAAAAGCGATCACGTTCATGTTGTTGAAGTTGCAACGGCTGTGGATACTGAGGAACCTGTTCCTGCTGTTCAGACAGTACCTGTTCCAGTTCATGCTCCTATAATTCCTCAGTCGTCTGGTAAATTAAGTGCAGAAGTTGCAGCAATTAAGATTCAAACAGCTTTTCGAGGGTACTTGGCAAGAAGAGCATTGCGGGCTTTAAGAGGGTTGGTAAGGTTGAAATCTCTTATGGAAGGGTCAGTGGTAAAACGCCAAGCTGCAAGCACCCTTCGCTCTATGCAGACTTTATCTCGTTTGCAAGCGCAGATTCGTTCAAGAAGGATCAGGATGCTAGAGGAGAATCAGGCTCTTCAGAGACAATTCCTCCAGAAGCATGCAAAAGAGCTTAGCTTGCAGATGGGAGATGAATGGGATGATAGCCTGCAATCAAAGGAACAGGTTGAAGCCAAGTTACTGAGCAAGTATGAGGCCACTGTGAGAAGAGAAAGAGCTCTGGCTTATGCATTCTCTCACCAGCAAAATGGGAAGAATTCATCTAGATCTATAAACCCAGTATTTATGGATCCAACCAATACTGCATGGGGTTGGAGCTGGCTGGAGCGGTGGATGGCAGCCCGGCCCTGGGAGAGCAAAGACGTTAACGACCAATCATCTGTAAGAAGCTCAAGCCGTGGCATGACAGTCGGAGAAATCAGCAAATCCTATGCTAAATACCAGCTCAATTCTGAAAAGCACTCTCCAACAGCCAGCCAAAACCCAGGCTCACCTAGCTTTCACTCCCACGCAACTCCTTCCAAGCCACTTGCTTCTTCTGCATTACTTGCCAAGAAACTGAAGAAAGTGAGCCCCAAGGACACCTCGGTTATCGATGACGACTCTAAAAGCATGGTAAGTGTGCAGTCCGGGTTTAGGAGGCACTCCATTGCGGGATCATCCGTGAGAGATGATGAGAGCCTCGCAAGCTCTCCTGCGGTTCCAAGTTACATGGTGCCAACTCAGTCTGCAAAAGCCAAGTCCAAGACACACAATCCATTAGCCATAGAGAACGGGACAACAGAGAAAGGATCCTCTGCAACAGCAAAGAAACGACTGTCTTTCCCTGCTTCGCCGGCCAGGCCAAGGCGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCAGAGGTCACTGTGGCCAATGCTGTGGCTGGTTGA 1506 0.4681 MRVSPTKKKQRHSILHHLSASFGFQFRNQFGNAKKMGRKGNWFSSVKKALSPESKKSEDQKTSKSKKKWFGKQKLQISESYLETDKAPPLPPPEDAKLTNIENKSDHVHVVEVATAVDTEEPVPAVQTVPVPVHAPIIPQSSGKLSAEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGSVVKRQAASTLRSMQTLSRLQAQIRSRRIRMLEENQALQRQFLQKHAKELSLQMGDEWDDSLQSKEQVEAKLLSKYEATVRRERALAYAFSHQQNGKNSSRSINPVFMDPTNTAWGWSWLERWMAARPWESKDVNDQSSVRSSSRGMTVGEISKSYAKYQLNSEKHSPTASQNPGSPSFHSHATPSKPLASSALLAKKLKKVSPKDTSVIDDDSKSMVSVQSGFRRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSKTHNPLAIENGTTEKGSSATAKKRLSFPASPARPRRHSGPPKVESSFNAEVTVANAVAG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2168 501 MobiDBLite consensus disorder prediction 51 66 - -
Bisa07g2168 501 MobiDBLite consensus disorder prediction 428 466 - -
Bisa07g2168 501 MobiDBLite consensus disorder prediction 411 489 - -
Bisa07g2168 501 Pfam IQ calmodulin-binding motif 150 168 IPR000048 GO:0005515
Bisa07g2168 501 MobiDBLite consensus disorder prediction 344 368 - -
Bisa07g2168 501 SMART iq_5 146 168 IPR000048 GO:0005515
Bisa07g2168 501 MobiDBLite consensus disorder prediction 47 71 - -
Bisa07g2168 501 ProSiteProfiles IQ motif profile. 147 175 IPR000048 GO:0005515
Bisa07g2168 501 PANTHER IQ-DOMAIN 5-RELATED 36 482 - -
Bisa07g2168 501 MobiDBLite consensus disorder prediction 384 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2168 Bisa-ChrBisa07 50524163 50532464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2168 36 500 IQD Protein Family AT5G03040 51.205 3.55e-140 410
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0796 03 10534589 10537824 Bisa07g2168 07 50524163 50532464 CCT
Bisa07g2168 07 50524163 50532464 Bisa07g2168 07 50524163 50532464 ECH