Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2163 ATGTACGGAACTCCGGTGGAGAGGCATATAGTAGGATATGGCTCATCGGATCCAAGAGGCTTAGTGGATATGGTCGGCATTTATTTTCCCCAGCAGCTCTTCACAGTCGAACAAAGCTGGCTCGACCTCACATCTGCTCTCGTTTCCTTCTTTTATTCTCCATCGGGCAAATACCTAGCTTCCCAAGTAAAAAATCATGACGGCAGCTTTGTCTTGTCACTTGATTTCCAGCAGTTCCAAAATACATGTCATCTTGAGGAATTTTATAAAATGTTAGAGGAGAAACCTAAAATCGCTCTGTCATGCATGAGCGCTGCAGTTCACAAGGTTCTTATTACCAAATGGGAGAATGACAAATTCGAGGATGCGGCAAAAGTAGGCATCCGTCTGCATAACTGTCCTGAAACTATGATTTCTCTGAAAAACTTAAAAGCAGCATATATTGAAAAAAGGCAGAGTATAACATATGGGGACTTGGCAGACAAACTTGTCTCTGTGCGTGGTACTGTTGTGAAAGCCAGCACTGTCAGGCCTTTTGTGGTAGAAATGAGTTTTGAATGTGGAAAGTGCAAAGAAAGAATTAGGCGCATATTTCCTGATGGAAAATATTCACCACCATCAATTTGCAATTTGAATGGCTGCAAGAGCAAAATCCTTAATCCATTGCGATCAAAGGCTCAGACAATTGATTTTCAAAAAATAAGGCTGCAAGAACTACTAAAACCTGAAGACCATGAAGAAGGACGGGTGCCTCGAACAGTAGAATGTGAGCTTATCCAAGATCTTGTTGATGCATGCATACCTGGAGATGTCGTGACTGTTACTGGAATTATAAGAGGAATTAATTCCTACATGGATATTGGAGGAGGAAGATCAAAGAACAGAAACCAAGGATTTTACTATCTGTATCTTGAAGCTGTTTCCATACAAAATTCCAAATCACAGTCTACAACTGAGGATTTGCTAGACTGTAATCCCAAAGCAAGACCAGCTGAGTTGCTTGACTTATTTTCATTTTCTTCCAGGGATTTAGAATTTATTGTGAAATTTTCAAAGGAGCACGGTTCAGATTTGTTTCGGCAAATACTTCAATCTATATGCCCATCCATCTATGGCCATGAGGTTGTTAAAGCTGGAATAACGCTGGCATTATTTGGAGGTGTACGAAAACATTCTATGGATCAGAATAAGGTTCCTGTGAGAGGAGACATCCATGTCATAATTGTTGGTGATCCTGGACTAGGTAAAAGCCAGTTGCTACGAGCAGCAACAGCTGTTTCTCCACGAGGAATCTATGTCTGTGGTAATGGCACAACCAAGGCCGGCCTCACAGTAGCTGTAGTTAAGGATCCTATGACAAGTGATTATGCTTTTGAGGCTGGAGCCATGGTGCTGGCTGACAGTGGATTGTGTTGCATTGATGAGTTCGATAAAATGTCAGCAGAACATCAGGCTCTACTGGAGGCAATGGAACAGCAGTGTGTCTCTATTGCAAAGGCAGGATTGGTAGCAAGTTTATCAGCTCGAACTTCTGTCTTAGCGGCAGCAAATCCAGTTGGTGGTCATTATAACCGTGCAAAGACTGTGAATGAAAATTTGAAAATGAGTGCTGCACTGCTGTCCCGGTTTGATTTAGTTTTCATACTGCTGGACAAACCTGATGAAATTTTGGACAAGCGAGTCTCAGAGCACATCATGTCACTTCATGCTGGGACTGGACAACACTCACCAGCTGTTAAAAAGCGACGTGGAGATTTACCTTCTGATTCAAGAACCATGGTATCACATAATGCCGAAGGCGTAGATTTGGGTGTTAGATCTGGTTCTTTAGTTTCACGGTTGAGACTTGACCCACAAAGAGATGGTGATTTTGTTCCGTTGCCAATTCAACTTCTTCGAAAATACATTGCTTATACAAGGAGTTATGTCTTTCCCAGGATGTCCAAGCCAGCGGCAGAAATCCTACAAAAGTTTTACCTTAAACTAAGAGATCATAATACTTCAGCTGATGGTACACCGATAACAGCAAGGCAACTAGAAAGTCTGGTGAGGCTGGCTGAAGCTCGAGCTCGCCTAGAGTTGAGAGAAGAAATAACGGCCCAGGATGCGATGGATGTTGTTGAAATAATGAAAGAATCCCTGTACGATAAATTCGTTGATGAGCATGGCTTTGTGGATTTTGGCCGTAGCGGGGGGATGAGTCAACAGAAAGAGGCGAAACGCTTCCTAAGTGCTCTCAATAAACAATCAGAGTTACAGCAGAAAGATTGCTTTTCAATATCTGAAATATATAGTCTGGCAGATAGGATTGGCCTTCAAGTTCCTGATATTGACACTTTCATCGAAAATTTAAACAGCGTTGGTTATCTACTCAAAAAGGGTCCAAAGACATATCAGGTGTTGTCCTCCTCATATACACGAAGCCAATCATCTAGGGATGTGCATTACGGGTTTTTTTTGAGCCTTCATTTAAAAAGAAAAACAAGAGCATTTAACTTTCTTAGAGCATTATTTTTATATCACTTCAATGGGCAGGTGTAA 2541 0.4168 MYGTPVERHIVGYGSSDPRGLVDMVGIYFPQQLFTVEQSWLDLTSALVSFFYSPSGKYLASQVKNHDGSFVLSLDFQQFQNTCHLEEFYKMLEEKPKIALSCMSAAVHKVLITKWENDKFEDAAKVGIRLHNCPETMISLKNLKAAYIEKRQSITYGDLADKLVSVRGTVVKASTVRPFVVEMSFECGKCKERIRRIFPDGKYSPPSICNLNGCKSKILNPLRSKAQTIDFQKIRLQELLKPEDHEEGRVPRTVECELIQDLVDACIPGDVVTVTGIIRGINSYMDIGGGRSKNRNQGFYYLYLEAVSIQNSKSQSTTEDLLDCNPKARPAELLDLFSFSSRDLEFIVKFSKEHGSDLFRQILQSICPSIYGHEVVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLRAATAVSPRGIYVCGNGTTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDEILDKRVSEHIMSLHAGTGQHSPAVKKRRGDLPSDSRTMVSHNAEGVDLGVRSGSLVSRLRLDPQRDGDFVPLPIQLLRKYIAYTRSYVFPRMSKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLELREEITAQDAMDVVEIMKESLYDKFVDEHGFVDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFSISEIYSLADRIGLQVPDIDTFIENLNSVGYLLKKGPKTYQVLSSSYTRSQSSRDVHYGFFLSLHLKRKTRAFNFLRALFLYHFNGQV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2163 846 Gene3D - 179 229 - -
Bisa07g2163 846 Gene3D - 336 723 IPR027417 -
Bisa07g2163 846 Pfam MCM P-loop domain 355 569 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa07g2163 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 721 IPR027417 -
Bisa07g2163 846 MobiDBLite consensus disorder prediction 572 593 - -
Bisa07g2163 846 Gene3D - 160 281 IPR012340 -
Bisa07g2163 846 ProSiteProfiles MCM family domain profile. 358 565 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa07g2163 846 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 68 752 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bisa07g2163 846 CDD MCM8 362 713 - -
Bisa07g2163 846 Coils Coil 473 493 - -
Bisa07g2163 846 CDD MCM8_WHD 736 801 - -
Bisa07g2163 846 SUPERFAMILY Nucleic acid-binding proteins 67 282 IPR012340 -
Bisa07g2163 846 Pfam MCM OB domain 161 280 IPR033762 -
Bisa07g2163 846 Pfam MCM AAA-lid domain 631 714 IPR041562 -
Bisa07g2163 846 PRINTS Mini-chromosome maintenance (MCM) protein family signature 488 501 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa07g2163 846 PRINTS Mini-chromosome maintenance (MCM) protein family signature 461 475 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa07g2163 846 PRINTS Mini-chromosome maintenance (MCM) protein family signature 512 524 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa07g2163 846 PRINTS Mini-chromosome maintenance (MCM) protein family signature 539 547 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa07g2163 846 PRINTS Mini-chromosome maintenance (MCM) protein family signature 401 416 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa07g2163 846 FunFam DNA helicase MCM8 isoform X1 179 230 - -
Bisa07g2163 846 SMART AAA_5 402 554 IPR003593 GO:0016887
Bisa07g2163 846 SMART mcm 147 715 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2163 Bisa-ChrBisa07 50460784 50470406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2163 17 801 Core DNA Replication Machinery Family AT3G09660 70.685 0.0 1143