Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2159 ATGTTGGATCTTAATCTCAACGTTGGTTCCTCTGATTCTTCGTCTGGTTCCATCGCTATGGTTCACGGCGAGATTCCACCACTTTCTGGTAGCCAAATAGCTAGCTCTGGAAGCTTAAATTCTTTCCTGGTCAATGCGGATGCCTCCACCAACGCTTGTGACGATGATTCTTGCTCTTATGGCGATGCTTTTACTTACGACTTCGGTATACTGAAGAAGAACGCCGTGGATGGTGGCACAAGCTTCAAGGCAGTTGAAATTCGCCAAGCTGAATGTGACAATGTCTGTACTCCGACCATCCGGCTTTTACCGGCGGCCGGAGGGGGAGATAACCGCTTGACCGAGCTGGAAATCGGTCATCGGTTTCCTGGTTCTTCTACGACGAAGGGATGGTTGGATTTCTCGCGCAAGGAGATAGGTTGCGGTGGAGAGCTGGGGCTGAGGAAGCTGCCCCAGCTGCAGCAGAGACAGCAAGTGAAGAAGAGCCGGCGGGGACCTAGGTCGCGGAGCTCACAATATCGTGGCGTTACTTTCTATCGGAGAACGGGAAGATGGGAATCGCATATTTGGGATTGTGGGAAGCAAGTCTACTTGGGCGGATTTGATACAGCTCATGCTGCAGCAAGGGCATATGATCGAGCTGCAATCAAGTTCCGCGGCGTTGATGCAGATATCAATTTCAATATCACTGATTATGGTGATGATATAAACCAGATGAGTAACTTCACAAAGGAAGAGTTTGTGCATATTCTTCGTCGACAGAGCACTGGCTTTTCAAGGGGAAGCTCAAAATACAGGGGAGTTACTCTGCATAAATGTGGGCGTTGGGAAGCTCGTATGGGACAGTTTCTTGGGAAAAAGTATATATATCTTGGGCTATTCGATAGCGAAATAGAGGCTGCAAGGGCTTATGATAAGGCTGCCATAAAATTCAATAGAAAGGAAGCAGTCACAAATTTTGAGCCGAGCTTATACGAAGGGGAGATGATATCTCAGGCTAATAATGAAGAGATACAAATTTATGATAAAAACAAAATTCTTGATCTAAACTTGGGCATAGCTCCCCCTTGTTCCCCTGATAGTCAAATGGAGAACTTAAGCGATGAGAGTAGTTTCCGAGTTCAGCGTGCCTGGGATGACTTGCCTATTGATGGGAGAGTTACGTTTGAGCACTCTGCATCAAGATCATGGAAGGCTCAGCCGTCTTGTTGGTTATCTGCAGCTCCTGAGCATCCTTCCTTCTGGGGTAGTGCCAATTTCTTTCCCTTCTGTCAGGAAAGAGCAATAGAGAAGAAAATGGAAGCCAATCCCTTGCCAAATTGGTCATGGAATATCCAAGGTCCTCATGGCAGCGCAAGTCTTATTCCACCCTTCTCTGCTGCAGCATCATCAGGATTCCTTTCAACAATAGTACCATCAGCTGCTGATAAATGGCGGCGTAGAGAGATGAGAAAGCTGGTTGATGGCGATGGTGGGCAGTGGAGGTGGAGGACGACGTTCGCTGATAGAGCTTTGGAGGCTGAGAGAAAGTGA 1533 0.4762 MLDLNLNVGSSDSSSGSIAMVHGEIPPLSGSQIASSGSLNSFLVNADASTNACDDDSCSYGDAFTYDFGILKKNAVDGGTSFKAVEIRQAECDNVCTPTIRLLPAAGGGDNRLTELEIGHRFPGSSTTKGWLDFSRKEIGCGGELGLRKLPQLQQRQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNITDYGDDINQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKFNRKEAVTNFEPSLYEGEMISQANNEEIQIYDKNKILDLNLGIAPPCSPDSQMENLSDESSFRVQRAWDDLPIDGRVTFEHSASRSWKAQPSCWLSAAPEHPSFWGSANFFPFCQERAIEKKMEANPLPNWSWNIQGPHGSASLIPPFSAAASSGFLSTIVPSAADKWRRREMRKLVDGDGGQWRWRTTFADRALEAERK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2159 510 SUPERFAMILY DNA-binding domain 171 229 IPR016177 GO:0003677
Bisa07g2159 510 MobiDBLite consensus disorder prediction 154 173 - -
Bisa07g2159 510 Pfam AP2 domain 172 220 IPR001471 GO:0003700|GO:0006355
Bisa07g2159 510 Pfam AP2 domain 263 312 IPR001471 GO:0003700|GO:0006355
Bisa07g2159 510 SUPERFAMILY DNA-binding domain 263 322 IPR016177 GO:0003677
Bisa07g2159 510 SMART rav1_2 264 327 IPR001471 GO:0003700|GO:0006355
Bisa07g2159 510 SMART rav1_2 172 234 IPR001471 GO:0003700|GO:0006355
Bisa07g2159 510 ProSiteProfiles AP2/ERF domain profile. 172 228 IPR001471 GO:0003700|GO:0006355
Bisa07g2159 510 CDD AP2 263 323 IPR001471 GO:0003700|GO:0006355
Bisa07g2159 510 Gene3D AP2/ERF domain 263 322 IPR036955 GO:0003700|GO:0006355
Bisa07g2159 510 Gene3D AP2/ERF domain 171 230 IPR036955 GO:0003700|GO:0006355
Bisa07g2159 510 ProSiteProfiles AP2/ERF domain profile. 264 321 IPR001471 GO:0003700|GO:0006355
Bisa07g2159 510 FunFam AP2-like ethylene-responsive transcription factor 171 230 - -
Bisa07g2159 510 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 144 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2159 Bisa-ChrBisa07 50421478 50426981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2159 157 352 AP2-EREBP Transcription Factor Family AT4G36920 80.612 1.99e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa07g2159 AP2 1.5e-09 CL0081