Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2156 ATGGTGACAGAAGCCAGGTTTGTCATCCAAAAGACCAAAACGCACCGTATAGCCAAAGTAATGACTAAAAGTAAAAGGCACTCCGATTATTCGCAGCCGCAAGATCCTCGGGGGCCATGGCATCCCGTGACGTCATCAATTACGGATCTACCCCACCCGAAACGAAAGGGCTGCCTTCCTCGCGTGTCGCATCGCTTTGACACTGAAAGTCGGGTTTCGCAAGAGGCCTCACAACTGCGCGGCCTCCCATTGTGCACCGCACAAACATACACGCAAGACCACACATATGGGCAGACCAGTTTGACACATTCCAGTTCATCCCATTCTATCTCTACCTTCAACTCTTGGTCTTGCTATCTATATGCTCTCTGCCCTGCCATCAACTTCCGTACTTCCAATTCTCAATCAATGGCGACCTCTACGCCCACCGATGCTTCTGGCAAGAAGGTACGAAAGCCCTATACTATTACCAAGTCCAGGGAGAGCTGGACTGAGGAAGAGCACGACAAGTTTCTCGAAGCTCTTCAATTATTTGACAGAGATTGGAAAAAAATTGAAGATTTTGTGGGTTCAAAAACAGTTATTCAGATTCGAAGCCATGCCCAGAAATACTTCTTAAAAGTTCAAAAGAATGGGACATTAGCACATGTGCCTCCTCCTCGCCCTAAGCGCAAAGCTGCTCATCCTTACCCGCAAAAGGCACCAAAGAACGTTTTGGTTCCATTGCCGTCATCCATGGCTTATGCTTCTTCAACAAATAGCCTTGCACATGGTTATGCCACTTGGGATGAAACTTCCATGATGATCAACACTGGATCTAACAAATATATACCCAGTCAGGATGAACTCACCACACTTCAAGGAAATGAAGCTGATATTGGATCGAAGGGGATAGCAAGGATTAGCAACAGCAGTTTCAGTGGTGTTGGGAACTCTACCAGAATGCTACCAAATTCTGATATGCCAAAGCAAGGGAAACAAGCTCCAGTGATTCACGGTTTACCAGACTTTGCTGAGGTTTATAGCTTTATTGGTAGTGTTTTTGATCCAGATACGAAAGGCCATGTCCAGAAGCTAAAGGAAATGGACCCCATAAATTTTGAAACTGTTTTGTTGTTGATGAGAAACCTCACCGTCAACTTGGCTAGCCCTGATTTTGAACCCTTTAGGATGGTCTTGTCATCATATGATGCCAATACCAAGACGGTAGAAGTTAATGCAGGAATTGCTGCCAAAAACGAAACAAATGATCTATCATGCCAACCTGCTTAA 1272 0.4528 MVTEARFVIQKTKTHRIAKVMTKSKRHSDYSQPQDPRGPWHPVTSSITDLPHPKRKGCLPRVSHRFDTESRVSQEASQLRGLPLCTAQTYTQDHTYGQTSLTHSSSSHSISTFNSWSCYLYALCPAINFRTSNSQSMATSTPTDASGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKAPKNVLVPLPSSMAYASSTNSLAHGYATWDETSMMINTGSNKYIPSQDELTTLQGNEADIGSKGIARISNSSFSGVGNSTRMLPNSDMPKQGKQAPVIHGLPDFAEVYSFIGSVFDPDTKGHVQKLKEMDPINFETVLLLMRNLTVNLASPDFEPFRMVLSSYDANTKTVEVNAGIAAKNETNDLSCQPA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2156 423 Pfam Myb-like DNA-binding domain 160 205 IPR001005 -
Bisa07g2156 423 MobiDBLite consensus disorder prediction 214 235 - -
Bisa07g2156 423 ProSiteProfiles Myb-like domain profile. 155 205 IPR001005 -
Bisa07g2156 423 NCBIfam myb-like DNA-binding domain, SHAQKYF class 158 207 IPR006447 GO:0003677
Bisa07g2156 423 CDD SANT 162 205 IPR001005 -
Bisa07g2156 423 Gene3D - 163 210 - -
Bisa07g2156 423 SMART sant 159 207 IPR001005 -
Bisa07g2156 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 209 IPR017930 -
Bisa07g2156 423 MobiDBLite consensus disorder prediction 20 57 - -
Bisa07g2156 423 SUPERFAMILY Homeodomain-like 154 210 IPR009057 -
Bisa07g2156 423 PANTHER SWI/SNF COMPLEX-RELATED 134 382 - -
Bisa07g2156 423 FunFam protein REVEILLE 6 isoform X1 162 210 - -
Bisa07g2156 423 ProSiteProfiles SANT domain profile. 158 211 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2156 Bisa-ChrBisa07 50403651 50409281 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa07g2156 Myb_DNA-binding 7.2e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g2156 07 50403651 50409281 Bisa07g2156 07 50403651 50409281 ECH