Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2153 ATGCCTCCTAAGCAGCAATCAAAAGCCGATGTAGCAAAGAAACAGAAGATCGTAGAGGATAAAACCTTCGGGCTCAAAAACAAGAACAAGAGCAAAAATGTTCAGAAATATGTGCATAGCCTCAAGCAGTCCGTGCAGCCCAAGGCTGATCCTTCCAAAGTCGCTGCCAAGAAAAAGAAGGAGGAAGAAAAGGCCAAGGATAAGGAGTTGAATGATTTATTCAAAATCGCTGTTAGCCAGCCTAAAGTGCCAGTTGGTGTCGATCCCAAGTCCATATTATGTGAGTTTTTTAAAGCGGGACAGTGCACCAAGGGCTTTAAATGCAAGTTCTCACATGATTTGAATGTTCAAAGGAAAGGGGAAAAAGTTGATATTTACAGCGATAAGCGCGACCAGGAAACTATGGAGGATTGGGACCAGGAGACCTTGGAGAAAGTGGTGGAGTCAAAGAAAACCGAGTATAAACAGAACAAGCCAACTGATATAGTCTGTAAGTACTTTTTGGAAGCAGTGGAGAAGAAACAATATGGTTGGTTTTGGATTGAAAATCAGCGTGCTAAAGTGAAAACTTCGACTCCCATGACTCCTGAGTTATTTATGCAATGGAAGAAGAAGAAGATAGAAGAACGAGATGCCAATATGGCTGCCCAGCAGGCAGAGAGGGCTAAAAATGACCGCATGAGTGGGCGCGAGTTATTTTTGGCAGATGCTAGCTTTTTTGTGGATGATGTTGAAGCATATGAAAAGTACCAAAGAGAACCAGAATCTGATGACACTGAACAGGTTAGTTTATGCTCTATGTATTATGTGTGTGCGGGCAGCAGTGCTGCTGAAGGTGGTCCAAGCTCCTCAACGGTTGGTGGGGATGCTGAAGTTCCTGATGATGATGATGATGAACTGGACCTGGATGAGTTGAATGAATTGGAAGAAAGCTTATCAAAGACTTCAATCCAAACAAAGGAGCCAAGAGCTGAAGCTTAA 981 0.4312 MPPKQQSKADVAKKQKIVEDKTFGLKNKNKSKNVQKYVHSLKQSVQPKADPSKVAAKKKKEEEKAKDKELNDLFKIAVSQPKVPVGVDPKSILCEFFKAGQCTKGFKCKFSHDLNVQRKGEKVDIYSDKRDQETMEDWDQETLEKVVESKKTEYKQNKPTDIVCKYFLEAVEKKQYGWFWIENQRAKVKTSTPMTPELFMQWKKKKIEERDANMAAQQAERAKNDRMSGRELFLADASFFVDDVEAYEKYQREPESDDTEQVSLCSMYYVCAGSSAAEGGPSSSTVGGDAEVPDDDDDELDLDELNELEESLSKTSIQTKEPRAEA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2153 326 MobiDBLite consensus disorder prediction 307 326 - -
Bisa07g2153 326 MobiDBLite consensus disorder prediction 290 306 - -
Bisa07g2153 326 Gene3D - 87 145 - -
Bisa07g2153 326 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Bisa07g2153 326 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Bisa07g2153 326 Pfam DRG Family Regulatory Proteins, Tma46 180 258 IPR032378 -
Bisa07g2153 326 Gene3D - 180 238 - -
Bisa07g2153 326 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 180 - -
Bisa07g2153 326 SUPERFAMILY CCCH zinc finger 88 113 IPR036855 GO:0046872
Bisa07g2153 326 MobiDBLite consensus disorder prediction 40 66 - -
Bisa07g2153 326 MobiDBLite consensus disorder prediction 52 66 - -
Bisa07g2153 326 Coils Coil 205 225 - -
Bisa07g2153 326 MobiDBLite consensus disorder prediction 275 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2153 Bisa-ChrBisa07 50358122 50364252 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa07g2153 DFRP_C 2.2e-15 No_clan