Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2136 ATGGAAGAAATTGCAAGCATCATGCGAGCACTCTCCACCCTCAGTCCCTCTCACCTCTCCCATCTGATCCACTCTCTTGTCTCCTCCGGCCACCGCCACCACCGCCGCCTCTCTGCCGTCCTCTCCTCCCCACCCCTCTTTTTCACAACCCTACGCCACCTCCACTCTCTCTCCCTCCCCCAAAAGACCCTCCTCATCGCTCGCCAACTCCTCTCCTCCCTCCACCGCCTCCTCCTCCGCCACACCACACTCCCTCCTCCGCCCCCCTCCACCGCCATCTCAGAGCGTGACCTCGACGCGTTTCTCCTGCTCCTCTTCTTCTGCGAAACCCACCAACACAACCCTGAAGCCCTCCAGGCCAGTCACTCGGATTGGCGAGTGAACTTAAGCAAGCTTTACTCTCACAAGTTGTTGACGCTCTCTTATTCTCCCGTCGGCGCGTGTGCTTGGACCGTTTTGGTTCCTTACATTGAGATGGTGTGTCGGAGCTGGAGGCTCGTGGGGGCAATGGGGTGCGGCGGAGGGAAGGAGGAGGGGAAGTCCGAGGCGTCGGTGGTGGGGCTTGCTGCAGCGGAGGTGAGGGTGGGTGGAAGAGAAAGGGAGTGTGTGATATGTAAAGAGGAGATGAGAGAAGGGAGGGATGTGTGCGAGCTGCCATGTCACCACTTGTTTCATCGGATGTGTATATTGCCGTGGCTCAGGAAGACGAACACGTGCCCTTGCTGCCGGTTCAAGTTGCCGTCCGATGATGTCTTCGCAGAAATCCAACGGCTGTGGGAAGTTTTAGCTAATATGGATGGCAGAGATTGA 810 0.5802 MEEIASIMRALSTLSPSHLSHLIHSLVSSGHRHHRRLSAVLSSPPLFFTTLRHLHSLSLPQKTLLIARQLLSSLHRLLLRHTTLPPPPPSTAISERDLDAFLLLLFFCETHQHNPEALQASHSDWRVNLSKLYSHKLLTLSYSPVGACAWTVLVPYIEMVCRSWRLVGAMGCGGGKEEGKSEASVVGLAAAEVRVGGRERECVICKEEMREGRDVCELPCHHLFHRMCILPWLRKTNTCPCCRFKLPSDDVFAEIQRLWEVLANMDGRD 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2136 269 SMART ring_2 202 242 IPR001841 -
Bisa07g2136 269 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 160 247 - -
Bisa07g2136 269 SUPERFAMILY RING/U-box 199 249 - -
Bisa07g2136 269 CDD RING-H2_PA-TM-RING 201 243 - -
Bisa07g2136 269 ProSiteProfiles Zinc finger RING-type profile. 202 243 IPR001841 -
Bisa07g2136 269 Pfam Ring finger domain 201 243 IPR001841 -
Bisa07g2136 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 255 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2136 Bisa-ChrBisa07 50060495 50061304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2136 2 263 C3H Transcription Factor Family AT5G02750 50.000 5.75e-76 231