Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2120 ATGGGAAACGCACACGGCCATCGCAAACGCCATAACTCCATTCCTCAATACCCCATACCTCCCTCTTATAACTATGGTGTCCCGCCTTACCTTCAACCTCAACCTCAACCTCAAGCTCCAACCTCAGTTCACGCCACCCACAACTCCGGAATCTCCAGAATGCTGGCTTTACCTTATTCTCACGTCGACCACAGTTTGCGAGCTCTCGCCGGCCAGGCTGAAGGCTTTGGTCGGCTTGCAATCGGTGGGCTTCACGGTCCCCTTTATCACGTCACGACTTTAGCAGATGATGGACCGGGATCACTCCGTGATGGGTGTCGCAGAAAAGAACCATTGTGGATTGTATTTGAGGTTTCAGGCACTATCCATCTCTCATCTTACTTGAGTGTGTCATCTTACAAGACTATTGATGGCCGGGGTCAAAGAATTAAACTCACTGGAAAGGGTTTGCGGCTGAAGGGATGTGAACATGTAATAATTTGCAACTTAGAGTTAGAAGGTGGTAGAGGGCCCGATGTCGATGGCATTCAGATCAAACCTAATTCAAAGCACATATGGATAGATCGTTGCAGCCTCCGTGATTTTGATGATGGACTGATAGATATAACGCGAGAAAGCACGGATATTACTATTTCTAGATGTCACTTTTCTCAGCATGACAAAACGATGCTTATTGGGGCAGATCCCTCACACACTGGTGATAGATGTATGAGGGTCACTATTCACCACTGTTTTTTTGATGGGACACGGCAGCGGCATCCTCGGGTTAGATATGCGAAAGTACATCTGTACAATAATTACACCAGAAACTGGGGCATATATGCTGTTTGTGCAAGTGTAGAATCACAGATATACTCTCAATGTAACATCTATGAAGCAGGGCAGAAGAAAGTGGCATTTAAGTATCTTTCTGAAAAGGCGGTAGACAAGGAGGGGGCAGCAACTGGTCATATAAGGTCTGAAGGGGACTTATTTGAGAATGGAACTCAAGCAGGATTAATGGCTGAGAGCATGGGAATGGGATGTACCACATTCCATCCTAGTCAACACTATGCCACGTGGACAGTTGCACCTCCCACACAGGATCTCAAACAGTTTCTTCAACACTGCACTGGATGGCAAAGTGTTGCTCCACCACCAGATCAACCAATGTCTGCATAG 1161 0.4668 MGNAHGHRKRHNSIPQYPIPPSYNYGVPPYLQPQPQPQAPTSVHATHNSGISRMLALPYSHVDHSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRRKEPLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKGCEHVIICNLELEGGRGPDVDGIQIKPNSKHIWIDRCSLRDFDDGLIDITRESTDITISRCHFSQHDKTMLIGADPSHTGDRCMRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLSEKAVDKEGAATGHIRSEGDLFENGTQAGLMAESMGMGCTTFHPSQHYATWTVAPPTQDLKQFLQHCTGWQSVAPPPDQPMSA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2120 386 PRINTS Pollen allergen Amb family signature 72 89 IPR018082 -
Bisa07g2120 386 PRINTS Pollen allergen Amb family signature 127 143 IPR018082 -
Bisa07g2120 386 PRINTS Pollen allergen Amb family signature 274 293 IPR018082 -
Bisa07g2120 386 SMART amb_all 99 297 IPR002022 -
Bisa07g2120 386 Gene3D - 58 367 IPR012334 -
Bisa07g2120 386 PANTHER PECTATE LYASE 18-RELATED 61 332 IPR045032 GO:0030570
Bisa07g2120 386 Pfam Pectate lyase 128 290 IPR002022 -
Bisa07g2120 386 SUPERFAMILY Pectin lyase-like 70 376 IPR011050 -
Bisa07g2120 386 MobiDBLite consensus disorder prediction 25 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2120 Bisa-ChrBisa07 49855840 49858900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2120 94 381 Polysaccharide Lyase AT3G55140 76.389 1.77e-168 471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g2120 07 49855840 49858900 Bisa07g2120 07 49855840 49858900 ECH