Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2117 ATGACTGATATCAGTCACAGGCTTTCGATTCCTTCTGTTGCATTTCATGACCATTTCCCACCAATCATCTATGGCAATAGAGTCAACATTAGGGTGAGGTATGGGTATGGGAACGATGAGCCATGGAACCTGCCATGCTACACCAGAGGACCTAGTTCTCCTTATAACAAGCCAGTTATGTCAGGAGGCTGGCGTCGTTTTGCTGCCGATAAAGGATTTGCTGTGGGAGATCTTCTCATATTCTACAAGGAACGAGATCAACAGGGCCGCGTTTATCGTTTCGTGGTGCTGAGAGAGGATGATGGTGAAATGTGCTTGGTTTAA 324 0.463 MTDISHRLSIPSVAFHDHFPPIIYGNRVNIRVRYGYGNDEPWNLPCYTRGPSSPYNKPVMSGGWRRFAADKGFAVGDLLIFYKERDQQGRVYRFVVLREDDGEMCLV 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2117 107 CDD B3_DNA 4 98 IPR003340 GO:0003677
Bisa07g2117 107 Gene3D - 1 103 IPR015300 -
Bisa07g2117 107 SUPERFAMILY DNA-binding pseudobarrel domain 6 95 IPR015300 -
Bisa07g2117 107 ProSiteProfiles B3 DNA-binding domain profile. 1 100 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2117 Bisa-ChrBisa07 49754164 49754487 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2117 6 92 RAV Transcription Factor Family AT3G25730 27.778 5.50e-06 41.6