Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2107 ATGAAGAGACAGAGAGATTACGAAGGAATAGAGAGCTTCGACATAGCAAAATGTCTAGTAATGTTGTCTAATACCCGGGAGATTCAAAACTCTCACATATCACAACCTGTTGAATTCGAATGCAAGACTTGTAACCGTAAGTTCTCGTCGTTTCAGGCCCTTGGTGGGCACAGGACTAGCCACAAGAGATCCAAGCTTGACGGTGATCTTGAACTCAAAGCAGAGGCCAAATCTCTGAGCTTAGCCACTAAACCCAAGACGCACGAGTGTTCCATTTGTGGGCTCCAGTTCTCTCTGGGCCAAGCCCTGGGTGGCCACATGAGGAGGCATAGAGCTGTTGCCGTTAACCTAGGCTATTCTGATTCCCATGACGTCGTTCCGAAAGTGCCAGTTCTGACGAGATCCAATAGCAAAAGGGTTTTCTTGGACCTTAACTTGACCCCTCTCGAGAATGACTTGAAGCTTTTGTTTGGCAAGATGGCACCTAGAGTTGACGCCTTGTTCATCTGA 510 0.4745 MKRQRDYEGIESFDIAKCLVMLSNTREIQNSHISQPVEFECKTCNRKFSSFQALGGHRTSHKRSKLDGDLELKAEAKSLSLATKPKTHECSICGLQFSLGQALGGHMRRHRAVAVNLGYSDSHDVVPKVPVLTRSNSKRVFLDLNLTPLENDLKLLFGKMAPRVDALFI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2107 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 110 IPR013087 -
Bisa07g2107 169 SMART c2h2final6 88 110 IPR013087 -
Bisa07g2107 169 SMART c2h2final6 39 61 IPR013087 -
Bisa07g2107 169 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Bisa07g2107 169 Pfam C2H2-type zinc finger 39 63 - -
Bisa07g2107 169 Pfam C2H2-type zinc finger 88 112 - -
Bisa07g2107 169 SUPERFAMILY beta-beta-alpha zinc fingers 39 110 IPR036236 -
Bisa07g2107 169 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Bisa07g2107 169 Gene3D Classic Zinc Finger 36 110 - -
Bisa07g2107 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Bisa07g2107 169 PANTHER ZINC FINGER PROTEIN ZAT5 16 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2107 Bisa-ChrBisa07 49598258 49598767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2107 1 169 C2H2 Transcription Factor Family AT2G37430 48.619 2.55e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g2107 zf-C2H2_6 2.8e-10 CL0361