Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2096 ATGGCTTTCGTCTCTGGAATTCGACGCCTCATTAGCGAGTCTTCTGTTAGATCTTCAATTCTCCACTCCCACTTCAATTCAATTCGCCTCAGTTCAACTCTCACAGCTCCCAAACTTTTCGTTAGTGGTCTTTCGAGACTGACAACAGATGAAAAATTAAAAGAAGCATTTGCTCCTTTTGGGCAGCTGGTGGAAGCTAAGGTTATAACTGATAGAGTCTCTGGAAGATCAAAGGGATTTGCTTTTGTAACCTATTCAACAGTTGAAGAAGCTGAAAGAGCCAAGGAAGGTATGAATGCCAAGTTCTTGGATGGATGGGTTATATTTGTGGACCCTGCCAAGCCAAGAGAGCCCAGACCTCCTCAGCAATCACAACCTCAGCCCTCTGGAACTGGCTTCACAGTTAACAAGACCATTGGATGGTCTGGAGCTCTTACTGTGCGTTTGGATCAAGCACTAGAACCATGGTCCATGGGATTGAGGGAGGCCGGATTTGCAACGGTGGAAGGCACACTGGCGATGGAGATTAAGTTGCAGTGGAAGACAGCTGTAAGCCTCAGACACTACCTTCCTGTTCTCTTTCTCGAGGCTCTTTTCTTTTTAATGCTTGCATATTGCAAATGGCCTCAATTTCGGTCAACTTACGAGACGCATGGAAATGATCAAATGTTCTGGAGTATAACATTCAAATACAATGCTGGCAGGTTTGTTCAGAGCACAAAATGTTCACACATGAAAACAACCAAATCAACAAACATACAGTCCAAACTTTTACTGCATTTCCAAATCCATAGAATATGGCAAAAAGAAATCTTTATATTTACACAACGTCAGAAATAA 840 0.4286 MAFVSGIRRLISESSVRSSILHSHFNSIRLSSTLTAPKLFVSGLSRLTTDEKLKEAFAPFGQLVEAKVITDRVSGRSKGFAFVTYSTVEEAERAKEGMNAKFLDGWVIFVDPAKPREPRPPQQSQPQPSGTGFTVNKTIGWSGALTVRLDQALEPWSMGLREAGFATVEGTLAMEIKLQWKTAVSLRHYLPVLFLEALFFLMLAYCKWPQFRSTYETHGNDQMFWSITFKYNAGRFVQSTKCSHMKTTKSTNIQSKLLLHFQIHRIWQKEIFIFTQRQK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2096 279 Gene3D - 23 127 IPR012677 -
Bisa07g2096 279 FunFam RNA binding protein 24 137 - -
Bisa07g2096 279 PANTHER NUCLEOLAR PROTEIN 8 22 143 - -
Bisa07g2096 279 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Bisa07g2096 279 SMART rrm1_1 38 111 IPR000504 GO:0003723
Bisa07g2096 279 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 105 IPR000504 GO:0003723
Bisa07g2096 279 SUPERFAMILY RNA-binding domain, RBD 38 138 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2096 Bisa-ChrBisa07 49429185 49432704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2096 39 127 Eukaryotic Initiation Factors Gene Family AT3G16380 39.362 6.49e-13 66.6