LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g2086	ATGGCGGCGGCGAGGCGTCTCCGGGATCTCCAAGCCCAATCGGGCAACAAGATCTGCGTTGATTGCTCTCAGAAGAACCCGCAGTGGGCTTCTGTCTCCTACGGCGTCTTCATGTGCTTGGAGTGCTCTGGCAAGCACCGTGGCCTCGGTGTGCACATCTCCTTTGTCCGATCCGTTACTATGGACTCCTGGTCCGATATCCAGATCAAGAAAATGGAAGCTGGTGGAAACGACAAGCTGAATGCCTTTTTTGCTCAGTATGGCGTCCCCAAGGAGACTGATATCGTCGCCAAGTACAATACCAATGCTGCCTCCGTATATAGGGACCGAATTCAGGCCATCGCCGAGGGCCGACCGTGGCGGGATCCACCGGTTGTGAAGGAAAACATTGGTCTTGGCAAGAGTAAGCCTCCGTTGCCGCAAAACAGCGGTGGGGGCAATCGCAGGAATAATGGGGGTTGGGATGATTGGGATAACGATGATGCATCCAGATCTCACAATGATATCAGGCGGAATTATTCGATGGGGGATGTTAGGGCAGTGAATGGAGGTGGCGCGGGAAGCACACCCGTGAGATCGAGATCGACAGAGGATATATACACGCGGTCGCAATTGGAGGCCTCTGCTGCTAATAAAGAGACCTTTTTTGCTCGGAAGATGGTGGAGAACGACTCAAAGCCCGAAGGGATTCCTCCGTCACAAGGTGGCAAGTACGTTGGGTTTGGATCTAGTCCTGCGCCACCCCGGACCAGTAATCCGCAAACCGATTATTTCTCTGTTGTTTCTCAGGGACTTGGTAAATTATCATTGGTTGCTGCCTCTGCGGCTCATTCTGCTGCTAATGTTGTTCAAGCAGGCACAAAAGATATTTCTTCCAAGGTAAGGGAGGGTGGTTATGACCACAAAGTCAATGAAACAGTCAATGTTGTCACTCAGAAAACATCGGAAATTGGACAGAGGACGTGGGGAATCATGAAAGGAGTCATGGCAATGGCTTCACAGAAGGTTGACGAGTACACAAGAGATAACACTAATTGGAGGAGTGATAGCTGGCAACGAAATGAAAGTGATAGAAATGGTTACTACCAGGATTTCAATCAAGAGAACAAGGGCTGGAATTCCTCTTCTGGAGGACAACCTTCATCAGTTGGGCAGTTTAATTCTCAACGTTCAAGCTCTTGGGATGATTGGGACCGCAAAGATACTACCAGAGGATCAGCCCCCCGCTCATCAGGTGGGCCATCTAATACTTACGGCTCAAGCTCATGGGATGATTGGGACCACAAAGAAACTAGGAAGGAAGAACCATCTAAAGGATCAGGTGCTAATAACGATGATGGCTGGGCCGGCTGGGATGATGCCAAAGATGATGGATATGATAATTTCTATGGGGGTTTGAAAAGTTTGTCCTATCTTTACATTACTAATTTCATGACTGATGTCATGCAAGTCAGCAAAGGTGCCATTAAGCATGAGGATGTACTGTCAACTCTGAGTTTGTTTATAAGTGTTAAAATCTGA	1521	0.4872	MAAARRLRDLQAQSGNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDIQIKKMEAGGNDKLNAFFAQYGVPKETDIVAKYNTNAASVYRDRIQAIAEGRPWRDPPVVKENIGLGKSKPPLPQNSGGGNRRNNGGWDDWDNDDASRSHNDIRRNYSMGDVRAVNGGGAGSTPVRSRSTEDIYTRSQLEASAANKETFFARKMVENDSKPEGIPPSQGGKYVGFGSSPAPPRTSNPQTDYFSVVSQGLGKLSLVAASAAHSAANVVQAGTKDISSKVREGGYDHKVNETVNVVTQKTSEIGQRTWGIMKGVMAMASQKVDEYTRDNTNWRSDSWQRNESDRNGYYQDFNQENKGWNSSSGGQPSSVGQFNSQRSSSWDDWDRKDTTRGSAPRSSGGPSNTYGSSSWDDWDHKETRKEEPSKGSGANNDDGWAGWDDAKDDGYDNFYGGLKSLSYLYITNFMTDVMQVSKGAIKHEDVLSTLSLFISVKI	506

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g2086	506	Gene3D	Arf GTPase activating protein	1	124	IPR038508	-
	Bisa07g2086	506	MobiDBLite	consensus disorder prediction	345	392	-	-
	Bisa07g2086	506	SMART	arf_gap_3	4	120	IPR001164	GO:0005096
	Bisa07g2086	506	CDD	ArfGap_ArfGap1	3	117	-	-
	Bisa07g2086	506	MobiDBLite	consensus disorder prediction	122	197	-	-
	Bisa07g2086	506	MobiDBLite	consensus disorder prediction	153	173	-	-
	Bisa07g2086	506	MobiDBLite	consensus disorder prediction	406	422	-	-
	Bisa07g2086	506	FunFam	ADP-ribosylation factor GTPase-activating protein	1	129	-	-
	Bisa07g2086	506	Pfam	Putative GTPase activating protein for Arf	5	101	IPR001164	GO:0005096
	Bisa07g2086	506	PRINTS	HIV Rev interacting protein signature	35	52	IPR001164	GO:0005096
	Bisa07g2086	506	PRINTS	HIV Rev interacting protein signature	56	77	IPR001164	GO:0005096
	Bisa07g2086	506	PRINTS	HIV Rev interacting protein signature	16	35	IPR001164	GO:0005096
	Bisa07g2086	506	MobiDBLite	consensus disorder prediction	345	449	-	-
	Bisa07g2086	506	PANTHER	ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED	1	405	IPR044519	GO:0005096\|GO:0016192
	Bisa07g2086	506	MobiDBLite	consensus disorder prediction	222	255	-	-
	Bisa07g2086	506	SUPERFAMILY	ArfGap/RecO-like zinc finger	5	111	IPR037278	-
	Bisa07g2086	506	ProSiteProfiles	ARF GTPase-activating proteins domain profile.	4	120	IPR001164	GO:0005096
	Bisa07g2086	506	MobiDBLite	consensus disorder prediction	423	440	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g2086	Bisa-ChrBisa07	49271051	49273972	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g2086	5	91	C2H2 Transcription Factor Family	AT4G21160	50.000	2.06e-23	99.4

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa03g0711	03	9438814	9441553	Bisa07g2086	07	49271051	49273972	CCT
	Bisa07g2086	07	49271051	49273972	Bisa07g2086	07	49271051	49273972	ECH