Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2050 ATGACACGTCTCTCTCCTGCCTCCGAATACTACCGCGTAGAGGTTAAGTGCCGGCGACTGTTTTGCCGGGATTTCAGAAGTTACTGGAAAATGCCAACTCTGGTTGTCTTCCTCCTTGTTCTTCTTAATCTGTTTTTCTCTTGCTCAGGTTATTTCTCTTTGCCAACATTCATGTCTCCTTCTCCAATGCCATACCAGCCTTTGTCTGTCAGAGAGATGTTTGTTAAGCATGGTATGAAGGCAGATTTCACAATCGATTCTGCATCGTCTAATCTGTTCTTGAAGTCAATTTCTACTAGTGTGTCATTGGCTTCATCAAAACCAGCTAAAACTTGGTTAGTTAAGCCTTCTTTGGGACCATCTCCGGCACATCTGTTATTTCCAGCACCTGCTCCATCTCCATCTAGCCAAGGTCCCAGTGTGAATCAAAGACCAAGACATCATCATCGTCATCATCATCACCATAGCGTGAGGCCTCATGTAATTGCTCCATCCCCTTCTAAAGATCAAGGCTGTGACCAAATCTGTATGGACCCGCTTACAGCGGCTCCTTTTGGTTCACCTTGTGGCTGTGTATTTCCCATGAAAGTCAGACTTATACTGGATATAGCTCCTTATGCTGTTTTTCCTGTAATGAATGAGTTAGAGATTGAGGTTGCATCAGGCACATACTTGGAACAGAACCAGGTCAAGATAATGGGTGCAAATGCTGACAGCCAAAATCAGGGAAGAACGATAGTTGATATCAACCTAGTTCCACTGGGAGAGAAGTTTGACAACACAACTGCTGTTCTGATATATGAGAGGTTTTGGCATAAGAAAGTTCCTCTAAATGCAAGCCTCTTTGGTGATTATGCAGTTGTGTTCGTTAGTTATCCAGGGATTCCATCATCGCCGCCAGATGGAGGTTACCATGGGAGTGGTCCTAGTGAAAGTTCTGGTGGTCTTCCAATCACTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATCTTAGAACCATAATCATCATGGCTTTATCTGCCTTTGTACTCTTGTTGGTTTTGGTTGGAGCATTTTCCATCTTTTTGAAATGGAGGAAGATTAGGAGACCATCAAATGCTGTTGGTCCTGCATTTCCATCATCTATAAACAAGAGATCTGGCATGGGGTCGATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCCCTAATGTCCACCATGGCCACTTCTATTCTCTCGGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACGGATAAGTTCAGTGCAAAGAGAATATTAGGAGAAGGGGGATTTGGACGAGTTTATAATGGGACATTGGAAGATGGAACTGAAGTTGCAGTTAAGCTGCTAACAAGGGATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTCGAGATGCTAAGTCGCTTGCATCACCGTAATCTTGTGAAACTCATTGGTATATGCATTGAAGGGCGCAGACGTTGCCTGGTGTATGAGCTAGTCCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAATAAGAAGGGGCCTCTGGATTGGGAAGCAAGAATGAAAATTGCTCTTGGAGCTGCAAGAGGATTGGCCTATCTGCATGAGGATTCTAATCCTCGCGTAATTCACAGAGACTTTAAAGCTAGTAATGTGTTATTAGAAGACGACTTCACCCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACTCGTGTTATGGGAACTTTTGGGTATGTTGCACCAGAATATGCAATGACAGGACATTTACTTGTTAAAAGTGATGTTTATAGCTATGGTGTAGTTTTGCTAGAACTTCTTACTGGCAGAAAACCAGTGGACATGTCCCAGCCTCCAGGACAGGAGAATCTAGTAACATGGGCACGGCCACTCTTGACGAGTAGAGAAGGTCTAGAACAGCTAGTGGATCCATCTTTGGCTGGAAGCTATGACTTTGATGACATGGCTAAGGTGGCTGCCATTGCTTCCATGTGTGTTCACCCTGAGGTCACTCACAGACCTTTCATGGGTGAAGTTGTGCAGGCTCTAAAGTTGATATACAACGACACAGATGAGACCTGTGAGGATTTCTGTAGCCAGAAGGAATCTTCTGCGCAGGAGTCTGACATCAGAGGTGATCTTGTGCCTTCAGATAGCAGTTGGTGGAATGCGGGTGGGGTAACCCCACGATTAACTTATGGGCAAGCATCTTCCTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTGATTGGAGACGAGATGTCTTTACCAATTAGGCATGGCAATAGATCAGGTCCCCTAAGAACAGTCCGAAGCAAGCTGTCTTTGTATAGATTTACTGGAAGTCGGAGTGAACATGGGGGACTTCATTCCAAGCGTGGCTGGAACGATGGTTACTGGGTTTAA 2484 0.4416 MTRLSPASEYYRVEVKCRRLFCRDFRSYWKMPTLVVFLLVLLNLFFSCSGYFSLPTFMSPSPMPYQPLSVREMFVKHGMKADFTIDSASSNLFLKSISTSVSLASSKPAKTWLVKPSLGPSPAHLLFPAPAPSPSSQGPSVNQRPRHHHRHHHHHSVRPHVIAPSPSKDQGCDQICMDPLTAAPFGSPCGCVFPMKVRLILDIAPYAVFPVMNELEIEVASGTYLEQNQVKIMGANADSQNQGRTIVDINLVPLGEKFDNTTAVLIYERFWHKKVPLNASLFGDYAVVFVSYPGIPSSPPDGGYHGSGPSESSGGLPITANFVSKNQKMNLRTIIIMALSAFVLLLVLVGAFSIFLKWRKIRRPSNAVGPAFPSSINKRSGMGSMLSSSITSSTSVSLMSTMATSILSVRTFSLSELEKATDKFSAKRILGEGGFGRVYNGTLEDGTEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVDNKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDETCEDFCSQKESSAQESDIRGDLVPSDSSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLIGDEMSLPIRHGNRSGPLRTVRSKLSLYRFTGSRSEHGGLHSKRGWNDGYWV 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2050 827 PANTHER OS01G0750732 PROTEIN 165 720 - -
Bisa07g2050 827 CDD STKc_IRAK 430 699 - -
Bisa07g2050 827 Gene3D Transferase(Phosphotransferase) domain 1 500 723 - -
Bisa07g2050 827 MobiDBLite consensus disorder prediction 143 159 - -
Bisa07g2050 827 Pfam Protein tyrosine and serine/threonine kinase 426 695 IPR001245 GO:0004672|GO:0006468
Bisa07g2050 827 Gene3D Phosphorylase Kinase; domain 1 395 499 - -
Bisa07g2050 827 SUPERFAMILY Protein kinase-like (PK-like) 408 700 IPR011009 -
Bisa07g2050 827 MobiDBLite consensus disorder prediction 129 164 - -
Bisa07g2050 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Bisa07g2050 827 ProSiteProfiles Protein kinase domain profile. 424 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2050 827 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Bisa07g2050 827 FunFam Receptor-like serine/threonine-protein kinase ALE2 500 717 - -
Bisa07g2050 827 FunFam receptor-like serine/threonine-protein kinase ALE2 397 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2050 Bisa-ChrBisa07 48693461 48699261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2050 175 813 Receptor kinase-like Gene Family AT5G56890 55.556 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bisa07g2050 PK_Tyr_Ser-Thr 9e-48 CL0016