Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2043 ATGATAAGTGATGTCAATTATTCTGAGGCAATTTCTTTTTCTGGTACTCGAAGAAGCAATGCATTTTTGAAACGTACCCAAGAGTTGTCCTAGATGGCGCTGTGGATGGAAAAGGGTTCGGAGCCCTTGACCGAAAAGGAGAAAGCAGACCTTGATGCTATTGCTGCACTTAAAGAGTCTGCTGCCATTGAACTTAAGGAAAAGGGTAATCAATATGTCAAGATGGGTAAAAAGCACTATTCTGATGCTATTGATTGTTACACAAGGGCAATAGATCAGAAAGCCTTAAGTGACTCTGAGAACTCAGTTCTTTTTGCAAATAGAGCACATGTAAATTTGCTACTAGCAAATTATCGACGTGCTCTGACAGATGCTGAGGAGGCAATTAAGTTGTGCCCCTCAAATATTAAGGCAATTTACAGAGCTGTCAAAGCATCTCTTTCACTAAATTTATTGGCTGAAGCACAATCCCATTGTCAAAATGGCCTTCAGTTGGACCCAAATAATGAAGAGTTGAAGAAACTTGGCCAGCAGATTGATCAGAAGAAATCAGAGCATGAAAAGCATGAGGCTGAAGTCTCCAAAGCTGTTACAGAAGCAAAGGAGCTAGTGTCTGCAATAGAAAATAGAGGCTTGAGGATTGGGAAGGCAATGTATCAAGAACTCACTGGACTAAAAAAGCCAGTATTGGACAAAAATAATATTCTTCATTGGCCTGTTCTTCTACTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTGTGAGACTGACATGTTAACAGTTCATCTTGATATGATATCCTTTTCTATAAATTGCTTTATTTGCTTTATATATCAGCCACTGCCATGGGATGACAAAAACAATTACAAACGTGAATTTATTGAATTATATTATGAGGCTGGTTCTGGAGTTTGTTTATCAAAGGCAAAACTACGTCATTATTTATTAGAAGGGACTGGAGCTTCTCATGGGGTAAATGTTGGTGATGAAGAGAAAGATGCAGTTGATGATTCCAACCATGTCATCGCAGGCACTCCTAAATGGATCAAAGTAAATGAAAGGACAACGCTCCATGATGTTCTGAAAGACCCCAACTTTGTCATTCCCGGGATCCCAGTGTTCTATGTCGTTTCAAAGCGATCCAGCTTTTACAGCAAGTTCAAAGCTGGAAAATGGGCCCCTCCAAGCATATGA 1203 0.3982 MISDVNYSEAISFSGTRRSNAFLKRTQELSXMALWMEKGSEPLTEKEKADLDAIAALKESAAIELKEKGNQYVKMGKKHYSDAIDCYTRAIDQKALSDSENSVLFANRAHVNLLLANYRRALTDAEEAIKLCPSNIKAIYRAVKASLSLNLLAEAQSHCQNGLQLDPNNEELKKLGQQIDQKKSEHEKHEAEVSKAVTEAKELVSAIENRGLRIGKAMYQELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMLTVHLDMISFSINCFICFIYQPLPWDDKNNYKREFIELYYEAGSGVCLSKAKLRHYLLEGTGASHGVNVGDEEKDAVDDSNHVIAGTPKWIKVNERTTLHDVLKDPNFVIPGIPVFYVVSKRSSFYSKFKAGKWAPPSI 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2043 400 SMART tpr_5 62 97 IPR019734 GO:0005515
Bisa07g2043 400 SMART tpr_5 102 135 IPR019734 GO:0005515
Bisa07g2043 400 SMART tpr_5 136 169 IPR019734 GO:0005515
Bisa07g2043 400 Pfam Cns1/TTC4 Wheel domain 231 306 IPR044059 GO:0051879
Bisa07g2043 400 SUPERFAMILY TPR-like 53 191 IPR011990 GO:0005515
Bisa07g2043 400 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 27 397 - -
Bisa07g2043 400 Gene3D Tetratricopeptide repeat domain 58 204 IPR011990 GO:0005515
Bisa07g2043 400 Coils Coil 172 199 - -
Bisa07g2043 400 CDD CTWD_Cns1-like 201 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2043 Bisa-ChrBisa07 48548083 48554371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2043 45 191 Calmodulin-binding Proteins AT3G25230 32.278 7.78e-10 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g2043 07 48548083 48554371 Bisa07g2043 07 48548083 48554371 ECH