Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2032 ATGTGCATCTTTTACGTCGAATTTCAGGGCAAGGAACTAAGGATGTACCCATTCATATCTTACCGCGTAAGATACTGTCGTTTGTCTGCAAATGGGCGACGAAACATTGGAAATATCCCTCAAAAGAAATATGGTCGTCTACGAGGAGCAAATTGGTACAATGAAGTAGAGGAGACATCGATGGAGAAGCACGAACCAGACAGCATCCATTCTGGGATTGAAGCGCGAAAGTCAATTGCTATGCCGGGTGGTTCCACTACTGGGTCGATGCTAACGGAGTCTAGGGATGATAATTTGGTCCTCTCTTCGGAGGACTCGTCGTGCCCTGAGGAGTCCGAGCTTGAATTGGGGCTTGGGTTAAGCCTTACTCATCCTCACATGAAGTCCCAGCCAACTCCAACGACTCAATATGCTAGAATTTTGACGGCTAATGATTTTCCTTCATCAGCGTCATCCTCCTCCTCTTCATCTTCCTCTCCTTCCTCGTTGAACAGGGCCAACGTAACGGCTGGGACCAAGAGAACTGCTGACTCTGTTGCCGCTACAAACGGTTCCAGTCAGGTTATTGGATGGCCTCCTCTTGGAACACATAGAATGAATAGCTTTAATAATAACCATGCAAAATCACGAGCGACTGAAGGATTCAATTCTATGGTTGAAAAAGTTAAGAGCAATCATACAACAGTAAGGAAGAATGCTGACAGTGGTAGTGATCAAAACAAAATTTGTGCCAAGGAAAATGGACACATTAGGAGTTCCCTACTTGTTAAAGTTAATATGGATGGGATACCGATTGGAAGGAAGGTTGATTTGAGTGCTCATAGTTCCTATGAAACCTTAGCACGAACTTTGGAGGATATGTTTAATGAACCAACTTCAGTTGTCACTGGCAGAGGATCAAATGGGGTGGATCATGGCATTGTGGTTGGAGCAGAGAAGGGACAGTCAAAATTGCTGGATGTATCTTCCAAGTTTGTGCTCACTTACGAAGACAAGGAAGGAGACTGGATGCTTGTTGGAGATGTTCCCTGGGGGATGTTCCTTAGCTCTGTGAGGAGACTGAGAATCATGAGGACGTCTGAGGCAAATGTACTTGCACCAAGATTGGAGGAAAAGCACAGCAGGCTGAGAAGTGGGCGCATGTAG 1146 0.4555 MCIFYVEFQGKELRMYPFISYRVRYCRLSANGRRNIGNIPQKKYGRLRGANWYNEVEETSMEKHEPDSIHSGIEARKSIAMPGGSTTGSMLTESRDDNLVLSSEDSSCPEESELELGLGLSLTHPHMKSQPTPTTQYARILTANDFPSSASSSSSSSSSPSSLNRANVTAGTKRTADSVAATNGSSQVIGWPPLGTHRMNSFNNNHAKSRATEGFNSMVEKVKSNHTTVRKNADSGSDQNKICAKENGHIRSSLLVKVNMDGIPIGRKVDLSAHSSYETLARTLEDMFNEPTSVVTGRGSNGVDHGIVVGAEKGQSKLLDVSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANVLAPRLEEKHSRLRSGRM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2032 381 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 113 362 IPR003311 GO:0005634|GO:0006355
Bisa07g2032 381 MobiDBLite consensus disorder prediction 146 208 - -
Bisa07g2032 381 ProSiteProfiles PB1 domain profile. 253 361 IPR000270 GO:0005515
Bisa07g2032 381 SUPERFAMILY CAD & PB1 domains 250 357 - -
Bisa07g2032 381 Gene3D - 249 371 - -
Bisa07g2032 381 MobiDBLite consensus disorder prediction 146 190 - -
Bisa07g2032 381 Pfam AUX/IAA family 139 368 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2032 Bisa-ChrBisa07 48326271 48329961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2032 249 368 B3 DNA Binding Superfamily AT1G59750 32.500 6.18e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa07g2032 AUX_IAA 5.9e-58 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0671 03 8754601 8757552 Bisa07g2032 07 48326271 48329961 CCT
Bisa07g2032 07 48326271 48329961 Bisa07g2032 07 48326271 48329961 ECH