Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2023 ATGTTTGTAAAGTTGGATCCTCATAGTTCATTGGACGTATTTGAGCAGCAGAAAGAGCCATCATATTCTTCATTTTCTCTTCGCCGAGAGGAGAGCGGGAGAGGAGAGAGACGCAGAAAGCTTCTGCGGTCAAGAATGTCGAAGAGAGGTCGCGGTGGTTCGGCCGGGAACAAGTTCCGGATGTCACTGGGTCTGCCGGTGGCGGCGACGGTGAACTGCGCCGATAACACTGGAGCAAAGAATCTATATATCATTTCGGTGAAGGGGATCAAGGGTCGCCTAAATCGTTTGCCGTCTGCTTGCGTTGGGGACATGGTCATGGCCACCGTGAAGAAAGGGAAGCCTGATCTTAGGAAGAAGGTCTTGCCCGCTGTCATCGTCCGCCAGCGCAAGCCATGGCGTAGAAAGGACGGTGTTTACATGTACTTTGAAGATAATGCTGGGGTCATTGTGAATCCTAAGGGTGAAATGAAAGGTTCTGCTATCACTGGTCCAATTGGCAAGGAGTGTGCAGATTTGTGGCCAAGGATTGCAAGTGCAGCCAATGCTATTGTTTGA 558 0.5054 MFVKLDPHSSLDVFEQQKEPSYSSFSLRREESGRGERRRKLLRSRMSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2023 185 Pfam Ribosomal protein L14p/L23e 67 185 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bisa07g2023 185 SMART Ribosomal_L14_2 64 185 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bisa07g2023 185 SUPERFAMILY Ribosomal protein L14 56 185 IPR036853 GO:0003735|GO:0005840|GO:0006412
Bisa07g2023 185 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 65 184 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bisa07g2023 185 MobiDBLite consensus disorder prediction 24 57 - -
Bisa07g2023 185 Hamap 50S ribosomal protein L14 [rplN]. 64 185 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bisa07g2023 185 FunFam 60S ribosomal protein L23 46 185 - -
Bisa07g2023 185 ProSitePatterns Ribosomal protein L14 signature. 124 150 IPR019972 -
Bisa07g2023 185 Gene3D Ribosomal protein L14 46 185 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2023 Bisa-ChrBisa07 48247189 48250318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2023 46 185 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 97.857 3.86e-99 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0661 03 8603295 8605112 Bisa07g2023 07 48247189 48250318 CCT
Bisa07g2023 07 48247189 48250318 Bisa07g2023 07 48247189 48250318 ECH