Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2019 ATGGGTATGTCTGGAGCATTGCCTTCATCCTTGCCAGTCCTTCCTGATCCTCAGCCGGCTTTCATGGCAAAACAGCTTGTGAATAGGCCTCTAACTCATATGAGTCATTTAAATTCCAGTGGAGCTGTTGGTCACATGTTTTCATCTTCCCCTGGATGTTCGACTGATCTTCATCACTCATCGCTTTCACCTCATGAAAAACACTCAAGAAATGCTCTTTTTATTTCACAGTCATCGAGTAACATGGCTTCATTGCCATTTTCATATTCTTCAAATAGTGGACCACCTCCTTCTACAACACCGAGTAATTATTTCAAAGAAAACAATGCTTCTTGGCATACAGAATCCTTGCCAAGCTTTCTTGAAATTCCTGTAAATACATCCGTTGAGAATAGTCAAGCAGAAAGAAGTGCCTGCACTATCGTGGCATCCGAGGAGTATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGACCAGCTTATCAGTGATGATGACAATTTGACTCCTAATTGGAATGATCTTCTTACTGACAACATTCAAGACCTTGAACCAAAGGTGTCAAACCAGGTTTCAAAATCATCTTCTTACGTTCCTGGAGACCAGTCCCAAGTTCATCAGCAACTTTCTGCTCCATCTGCAGACAATTTTGTTGGTGCTCCCACCTCTTCCTCAGCAAATTCTGCTCCCACCAAGCCAAGGATGCGTTGGACACCAGAGCTTCATGAGGCTTTTGTGGAGGCTGTCAACCAACTTGGTGGCAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGTCACTTGCAGAAATACAGGACAGCTAGATATAGACCGGAACCATCTGAAGGATCCTCAGAGAAAAAACTAACTTCTATTGAAGACATACCTTCTCTAGAATTGAAAACTGGTATTGAGATCACTGAGGCTCTGCGACTGCAGATGGAGGTTCAGAAGCGGCTGCATGAACAGCTTGAGATTCAAAGAAATTTGCAGTTGCGGATAGAAGAACAAGGAAGGTACCTCCAGAAGATGTTTGAGAAGCAATGCAAATCTGGCAATGACAAGAACGCATCGTCATCTTCCATGGACAATCCATCTGGAGTGTTGTCAGATGCTATCAAAGATTCTGCTGCCAAGAGTAAAGTGGAAGCCTCCCACGTGGACAACCGTTGCAGGTTCGGACGTGATCAAGCTAATGGCAGTACTACAGTTGAGGAAAGCTTTCTGGAAATGGGTGGGAAGAATGATGGTCCTAAAACTCAAGCTTCTGAGAATTCTCAGCAACATGCTGATGAAGACAATGCTCAAGCCTCAAAGCGGCAGAGGACAGACGAGTAA 1374 0.4389 MGMSGALPSSLPVLPDPQPAFMAKQLVNRPLTHMSHLNSSGAVGHMFSSSPGCSTDLHHSSLSPHEKHSRNALFISQSSSNMASLPFSYSSNSGPPPSTTPSNYFKENNASWHTESLPSFLEIPVNTSVENSQAERSACTIVASEEYCKQNDWQEWADQLISDDDNLTPNWNDLLTDNIQDLEPKVSNQVSKSSSYVPGDQSQVHQQLSAPSADNFVGAPTSSSANSAPTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPEPSEGSSEKKLTSIEDIPSLELKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQKMFEKQCKSGNDKNASSSSMDNPSGVLSDAIKDSAAKSKVEASHVDNRCRFGRDQANGSTTVEESFLEMGGKNDGPKTQASENSQQHADEDNAQASKRQRTDE 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2019 457 MobiDBLite consensus disorder prediction 388 405 - -
Bisa07g2019 457 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 203 450 IPR044848 GO:0003700
Bisa07g2019 457 MobiDBLite consensus disorder prediction 363 379 - -
Bisa07g2019 457 MobiDBLite consensus disorder prediction 361 457 - -
Bisa07g2019 457 Coils Coil 319 339 - -
Bisa07g2019 457 Pfam MYB-CC type transfactor, LHEQLE motif 316 363 IPR025756 -
Bisa07g2019 457 MobiDBLite consensus disorder prediction 186 233 - -
Bisa07g2019 457 FunFam Myb family transcription factor 230 288 - -
Bisa07g2019 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 228 288 IPR017930 -
Bisa07g2019 457 Gene3D - 230 289 - -
Bisa07g2019 457 SUPERFAMILY Homeodomain-like 229 285 IPR009057 -
Bisa07g2019 457 Pfam Myb-like DNA-binding domain 233 284 IPR001005 -
Bisa07g2019 457 MobiDBLite consensus disorder prediction 430 444 - -
Bisa07g2019 457 MobiDBLite consensus disorder prediction 186 231 - -
Bisa07g2019 457 NCBIfam myb-like DNA-binding domain, SHAQKYF class 231 285 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2019 Bisa-ChrBisa07 48227180 48230927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2019 9 395 G2-like Transcription Factor Family AT4G28610 52.488 1.70e-105 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa07g2019 Myb_DNA-binding 8.4e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0658 03 8556650 8560088 Bisa07g2019 07 48227180 48230927 CCT
Bisa07g1250 07 31771298 31776157 Bisa07g2019 07 48227180 48230927 CCT
Bisa07g2019 07 48227180 48230927 Bisa07g2019 07 48227180 48230927 ECH
Bisa03g0658 03 8556650 8560088 Bisa07g2019 07 48227180 48230927 ECH