Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2012 ATGCTCACTCGGAGTTCGTCGAAATTCGTGTGCTCGAATCCCCTGCTTTTCATTTTGGAAAGACAAAAGCTAAACATTATGGGGGATAGGCTCAGAGAAGATAGGAAAGGCGATCTTGGCAGGAGTCTGCAGACGTTAATGAAGTGCCTATGTTCAGGGGAGCAATCAAGTGAAGCTAATAATTTGGTTCCTTCATCTGAATCTCTTGCAACCAAACATTATTCAGCAAGTGGAATTTCTCGTCTAGCCCGTCAAATTGGCGAGAGGCCAGATACTGGCAATATAGAGGAAGCCGAATCATCCCTTTTTGAGAAGGGTTTTTTGAACTATGAGGAAGCTACAGCTCTTTTAGGAAAATATGAATATCAGAAAGGAAATATAGAGGCCGCTTTACATGTTTTTGAGCGTATAGATATCGGGGTTGTGACTTCCATGGTTAAAAATTCCCTTTCTAGAAGAGGAAAGCGCCATAAGAGACATTCTCAGAATTATGCTACACCACCAGTGTCCATTCATGCTGTCGGATTACTGTTGGAAGCAGTCTTCCTCAAAGCAAAGTCTTTGCAAAATCTCGGAAGGTTTAAAGAAGCTGCCCTATCTTGCAAAGTTATTCTGGACGTAGTTGAATCTTCATTTCCCCAAGGGTTGCCTGAAAACTGTGGTGCTGAATGTAAATTGCAGGAGACTCTGAGCAAGGCAGTTGAGTTGCTTCCTGAATTGTGGAAACTTGCTGATTTTCGTGAAGCTATTATATCTTACCGGCGAGCACTTCTTCATAAGTGGAATCTTGATGCAGAGACTACAGCAAAGATTCAGAAAAGGTTTATTGTTTTGCTTCTATATGGCGGAGAGGAGGCGAGCTCCCCAAGTCTCCGTTCCCAACTGGAAACCTCATATGTACCCAGAAACAACACAGAGGAGGCTATACTTCTTTTAATGATTCTGCTAAGAAAAGTCTCTCTCAATAGAATTCAGTGGGATCCTTCAATTTTGGACCACCTTACGTTTGCTCTATCTGTTTCAGGGGAAGAGACAGCTTTAGCCAATCAGTTGGAAGAATTGCTCCCTTTCACTATCAATCCAAGAGAAAAGTACCAAACTCTTGCTTTCTGTTATTATGGAGCACGTAAGGACTTGCTGGCACTTGATCTTCTTAGAAAATTGTTGAGTAGTAGAGAGGAAACAAAACCTGTTTTAGCCTTGTTAGTGGCTTCTAAGATCTGCTGCGAGAACCCAAGTCTTGCAGGAGAAGGGGTAAGCTTTGCTTGCAGTGTGCTTGAGAATTTGAATGGAAGATGTGATCAGTTTGAAAGTCTTGCAAATTGCTTACTTGGTCTTTCACTTTCAGCACATTCAAAATCTGCGATTTCTGATTCTGAGTGGTATAAGAGACAATCTGAGGCACTTCACAGACTGGAAATTGCCTGCAGAATGACCAGAATGAGAAACCCGTTTATACTATACCATCTCAGTGTAGAATATGCAGAACAAAGGCAGTTGGATGCTGCACTTGATCATGCCAAATGCTTTCTAGAATTGGAAGCAGGGTCTAATGTAAAAGGGTGGTTATTGTTAGCCCGGGTGTTATCAGCTCAAAATCGGAATATGGATGCAGAATCTGTCATCGATGCTGCTTTGGATCAGACTGGGGAATGGGACCAAGGAGATTTGTTGCGAACAAAAGCTAAACTTCAGATTGCACAGGGCCAGGGCCAGTTAAGGAGTGCCATGGAGACATATGCTAAGCTTCTCGCCGTTCTTAAAATTCAGAGTAAAAATTTTGGTTCTTCGAAGACGTTATATAAGGATAGAAGAGATCATGCTAGGAACTTGGAAATGGAAATATGGCATGATCTTGCTTTCTTACACATAAGCCTGTCTCAGTGGCATGATGCAGAAGTGTGTCTCTCAAAATCTAAGGCCATCAAACTATACTCTGCTTCCAGATGTCATGCAACAGGTAAAATCTACGAAGCAAAGGGTCTCCACAAAGATGCTCTAAAAGCTTATCTTGAGGCTCTGGAGATCGAACCCCACCATGTCCCAAGCTTGATCTCTTCTGCTATAGTTCTCAGAGGGTGCTGTAAAGAATCAAATTCTGTAGCGAGAAGCTTTCTGATGGAGGCACTATGGCATGACAGATTGAGTGCTTCTGCTTGGTACCATCTTGGCCTTCTTCACAAGGCTGAGGGTAGAGCATCATCGTTAGAAGAAGCCATAGAATGTTTTCAGGCTGCACACATTCTTGAAGAATCTGTTCCGGTTGAACCTTTCAGATGA 2280 0.4259 MLTRSSSKFVCSNPLLFILERQKLNIMGDRLREDRKGDLGRSLQTLMKCLCSGEQSSEANNLVPSSESLATKHYSASGISRLARQIGERPDTGNIEEAESSLFEKGFLNYEEATALLGKYEYQKGNIEAALHVFERIDIGVVTSMVKNSLSRRGKRHKRHSQNYATPPVSIHAVGLLLEAVFLKAKSLQNLGRFKEAALSCKVILDVVESSFPQGLPENCGAECKLQETLSKAVELLPELWKLADFREAIISYRRALLHKWNLDAETTAKIQKRFIVLLLYGGEEASSPSLRSQLETSYVPRNNTEEAILLLMILLRKVSLNRIQWDPSILDHLTFALSVSGEETALANQLEELLPFTINPREKYQTLAFCYYGARKDLLALDLLRKLLSSREETKPVLALLVASKICCENPSLAGEGVSFACSVLENLNGRCDQFESLANCLLGLSLSAHSKSAISDSEWYKRQSEALHRLEIACRMTRMRNPFILYHLSVEYAEQRQLDAALDHAKCFLELEAGSNVKGWLLLARVLSAQNRNMDAESVIDAALDQTGEWDQGDLLRTKAKLQIAQGQGQLRSAMETYAKLLAVLKIQSKNFGSSKTLYKDRRDHARNLEMEIWHDLAFLHISLSQWHDAEVCLSKSKAIKLYSASRCHATGKIYEAKGLHKDALKAYLEALEIEPHHVPSLISSAIVLRGCCKESNSVARSFLMEALWHDRLSASAWYHLGLLHKAEGRASSLEEAIECFQAAHILEESVPVEPFR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2012 759 ProSiteProfiles TPR repeat profile. 647 680 IPR019734 GO:0005515
Bisa07g2012 759 Gene3D Tetratricopeptide repeat domain 33 611 IPR011990 GO:0005515
Bisa07g2012 759 Gene3D Tetratricopeptide repeat domain 612 754 IPR011990 GO:0005515
Bisa07g2012 759 SUPERFAMILY TPR-like 614 750 IPR011990 GO:0005515
Bisa07g2012 759 Pfam Tetratricopeptide repeat 650 680 IPR019734 GO:0005515
Bisa07g2012 759 PANTHER PROTEIN NPG1 47 759 IPR043376 -
Bisa07g2012 759 Coils Coil 726 746 - -
Bisa07g2012 759 SMART tpr_5 647 680 IPR019734 GO:0005515
Bisa07g2012 759 SMART tpr_5 519 552 IPR019734 GO:0005515
Bisa07g2012 759 SMART tpr_5 613 646 IPR019734 GO:0005515
Bisa07g2012 759 SMART tpr_5 178 211 IPR019734 GO:0005515
Bisa07g2012 759 SMART tpr_5 717 753 IPR019734 GO:0005515
Bisa07g2012 759 SMART tpr_5 484 517 IPR019734 GO:0005515
Bisa07g2012 759 SUPERFAMILY TPR-like 240 548 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2012 Bisa-ChrBisa07 48140788 48146402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2012 39 759 Calmodulin-binding Proteins AT4G28600 52.517 0.0 692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g2012 07 48140788 48146402 Bisa03g0650 03 8400608 8406243 CCT