Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2006 ATGGAAGTTGCAGCCTATGCTCTTCAACCTTACTGTTTTCGAGCCGTTTTCACGCCGCCGGAGCCAACAAGAAGTTTTCCCTTTGCTGCCTGGTGGCTTATTGGAGGTCTTGTCACAATGGATCACGTGATTGCTGGGAAGTTTAAGCTGGGAAGGAAAATTGGGAGTGGATCTTTTGGGGAGCTTTATTTGGCTGTTAATGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAGCCTGGGAAGACCAAGCATCCACAGCTTCACTATGAGTCAAAATTATATATGCTTCTTCAAGGAGGAACTGGGATTCCTCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTTATGGTTATTGACCTTCTTGGGCCAAGCTTGGAAGATCTCTTCAACTATTGCAACAGGAAATTCACATTGAAGACGGTGTTGATGCTTGCAGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTTCTTCACCGTGACATAAAGCCTGACAATTTTTTGATGGGTCTAGGACGCAAAGCAAACCAGGTTTACATCATTGATTATGGTCTTGCGAAAAAGTATAGGGATCTCCAGACTCATAAGCACATACCATACAGGGAAAACAAGAACCTCACTGGCACAGCTCGTTATGCCAGTGTCAACACACATCTCGGAATTGAACAAAGCAGAAGAGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTCCCTTGGCAGGGTCTGAAGGCTGGCACCAAGAAACAAAAGTATGATAAGATCAGTGAGAAGAAGTCGTCAACTCCAATAGAGGTGCTGTGCAAATCATATCCATCTGAGTTTGTATCCTACTTCCACTACTGCCGGTCATTGCGATTTGAGGACAAGCCAGATTATTCATATCTAAAGAGGCTCTTTCGTGACTTATTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCGCAGATTGGTAGCAGCACCTCTAAAGGGCGGCAAGGCACTGGCAAGGCACTTATGAATGCAGGACCATCTGTGCAAAAGCCAGAAAAGATCTCAGCTGGGAAAGAGACTCGAGAGAAATTTTCTGGTGCCCTTGAAGCATTTTCCAGGAGGAATCCCACAAGTTCTAGTCCTCATGGTGATCTCATCAAAAATAGAAATTTCGAGGATGTACCATTACACAGGGATGTGCAGCATGATCAGGAGAAGGGACGCGGTTCCTCTCGATATGGCAGCACCTCAAGAAAAGCCTTAGTCTCATCAAATAAGCCAAGTTCCTCTGGTGACCATTCGGATAGCCGTACCGGCAGACTGACATCAACTGCTAGCCGCCCATCTAGTGCATATAGAACCCAGCCTACCCTTGAGACCAAACCACCAACTTTTGCACGCAATACATCTTCAAGAGGCAATCGGGATGATCCTCTTCGGAGCTTTGAGCTCCTCTCTCTTAGGAAGTAA 1503 0.4484 MEVAAYALQPYCFRAVFTPPEPTRSFPFAAWWLIGGLVTMDHVIAGKFKLGRKIGSGSFGELYLAVNVQTGEEVAVKLEPGKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKSSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSTSKGRQGTGKALMNAGPSVQKPEKISAGKETREKFSGALEAFSRRNPTSSSPHGDLIKNRNFEDVPLHRDVQHDQEKGRGSSRYGSTSRKALVSSNKPSSSGDHSDSRTGRLTSTASRPSSAYRTQPTLETKPPTFARNTSSRGNRDDPLRSFELLSLRK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2006 500 MobiDBLite consensus disorder prediction 382 396 - -
Bisa07g2006 500 SUPERFAMILY Protein kinase-like (PK-like) 43 329 IPR011009 -
Bisa07g2006 500 MobiDBLite consensus disorder prediction 340 500 - -
Bisa07g2006 500 ProSiteProfiles Protein kinase domain profile. 48 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2006 500 MobiDBLite consensus disorder prediction 421 483 - -
Bisa07g2006 500 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Bisa07g2006 500 FunFam Putative Casein kinase I 40 124 - -
Bisa07g2006 500 PANTHER CASEIN KINASE-RELATED 46 420 - -
Bisa07g2006 500 MobiDBLite consensus disorder prediction 397 420 - -
Bisa07g2006 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Bisa07g2006 500 Pfam Protein kinase domain 49 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2006 500 SMART serkin_6 48 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2006 500 MobiDBLite consensus disorder prediction 484 500 - -
Bisa07g2006 500 FunFam Casein kinase 1-like protein 40 370 - -
Bisa07g2006 500 Gene3D Transferase(Phosphotransferase) domain 1 36 377 - -
Bisa07g2006 500 MobiDBLite consensus disorder prediction 365 379 - -
Bisa07g2006 500 CDD STKc_CK1_delta_epsilon 47 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2006 Bisa-ChrBisa07 48046736 48057353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2006 47 252 MAP Kinase Kinase Kinase AT3G06030 25.000 2.63e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bisa07g2006 Pkinase 4.1e-26 CL0016