Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2000 ATGGGTCTCAGAGACATTGGAGCTTCACTTCCTCCTGGGTTTCGTTTTTATCCGAGCGATGAGGAGCTGGTGTGTCATTACCTGTACAAAAAGATCACAAATGAGCAAGTTCTCAAGGGTACTCTCATCGAAATTGACTTGCACACTTGCGAGCCATGGCAGCTTCCCGAGGTGGCAAAGCTGAACGCGAACGAATGGTACTTCTTCAGCTTCCGAGACCGTAAATACGCGACGGGGTTTCGGACCAATCGGGCGACGACAAGTGGATATTGGAAAGCGACAGGGAAGGACAGGACAGTGGTGGACCCACTAACGCGTGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACATGAACAGAGCCCCCAATGGTATGAAAACTGGGTGGATCATGCATGAGTTTCGCTTGGAGACCCCACACATGCCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTTTTTCACAAAAGCAGAACAGACAACAGTGCCAAACTCAGCCCACAGAACGTGTTTGAGACCACACTTTCTCTAGATTCTTCAACCAATCAAATTGTGCCCCCTGGCTTTACCTCTTTCTCATCCATCCCATTAACCCATGATTACCAAACCCAGAACCAGAACAATTCTCTGATGAATCTTCTTCAATATTCTCGGGAAACAAACAACACCAACAGTGCCACTGTTAATCAAGTCAGTATTCCAAAAGGTGATCATGATGGATACGATGGGTTCTTATGGGACATGGATCTCGAAGAAAATAGCTTCCAGAATGACGTGGCCTCAAACCTGGACGCAATGAGATTCGAGGTTGATAATGATAGTATGGTGACGGATCTCCTTGGTCATCGATCGCCACATACGACGAGGGAGGCGTCGCCTCTAATGGCCGAGAATGAAAAGAAATGGAAGGAGGAAAGGTTACATATGAAAGCAATCTATTTGTTGCCAGGAGTGCTCTACTGGGAATCAAAGGGAAGGATGAGGAAAAGGGATAAAGGAGAAGGAAGCATCGGTGGGTCAACCATGATGATGCTCGACCACAGCACTCATTCCCTTTCCGCATGCTCTATTATGTCTCAAGCAGCAAAGGAGAACAAAAGGGATGGAAGGGTGATACGTGAAGCATTGGAAAGAAACAATGTAACGTGGCGTCCCAAGTATAGTGTAGCATTGTTGTTTGATTTGGATATTGGGATTCTTCTTCTCCTCCTTCTTGTTCTTATGCTTAAGCTGTTGCTGAGGGTTCTTCTCCTCCTCCACCTTCACATTGTACTTATGTCGGAGTATGAGACAATTTCCTTCGCCTTCTATGCTCGGATTGTCGTCCGCCATAGCTGTCGCCGCTACCGTCATCTTCTCCTTCTTCACGACAGAGTTCGGCTTAAGCCTCCTCCACACCCTTCACATGAAGGGCTGCAAGATGATGCTGGTGGTGCTGGAGATACTGTGCGAGAGCGCAGGGGGGAGGTTGGAGCTATTAGGGCACGCAGTGGGGATGGCGATGGTGTCGAAGAAGATTCTGAGGGTGTCCCGATGGCCAAAGATAGGGCGGTGAAGATTCTATTGTTTATTGTGAAGTTCTCTGCTGAGGAACGATGA 1599 0.4809 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEQVLKGTLIEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPLTREVVGMRKTLVFYMNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSRTDNSAKLSPQNVFETTLSLDSSTNQIVPPGFTSFSSIPLTHDYQTQNQNNSLMNLLQYSRETNNTNSATVNQVSIPKGDHDGYDGFLWDMDLEENSFQNDVASNLDAMRFEVDNDSMVTDLLGHRSPHTTREASPLMAENEKKWKEERLHMKAIYLLPGVLYWESKGRMRKRDKGEGSIGGSTMMMLDHSTHSLSACSIMSQAAKENKRDGRVIREALERNNVTWRPKYSVALLFDLDIGILLLLLLVLMLKLLLRVLLLLHLHIVLMSEYETISFAFYARIVVRHSCRRYRHLLLLHDRVRLKPPPHPSHEGLQDDAGGAGDTVRERRGEVGAIRARSGDGDGVEEDSEGVPMAKDRAVKILLFIVKFSAEER 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2000 532 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Bisa07g2000 532 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Bisa07g2000 532 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Bisa07g2000 532 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 218 - -
Bisa07g2000 532 MobiDBLite consensus disorder prediction 488 509 - -
Bisa07g2000 532 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2000 Bisa-ChrBisa07 47930481 47937927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2000 6 234 NAC Transcription Factor Family AT1G56010 46.091 3.03e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa07g2000 NAM 1.9e-36 No_clan