Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1996 ATGCCGTCCCTAATATCCCCCGGGAAAATCCATCGCTTGGAGATGGAGAATTTCAAGTCCTACAAGGGTTTTCAAGTAATTGGTCCTTTCTATGACTTCACCGCAATCATTGGCCCCAATGGTGCCGGCAAGTCGAACCTTATGGACGCCATTAGCTTTGTGCTTGGTGTAAGGACGGGCCAGCTGCGTGGGGCGCAACTCAAGGACTTAATCTACGCGTACGACGACAAGGAAAAGGAGCAGAAGGGACGGAGGGCGTTCGTTCGTTTGGTTTATCAGTTGGGCAATGGGTCGGAGATCCAATTCGCGAGGACCATCACGAGCTCCGGCGGGAGCGAGTACCGGATTGACGGGAACCTTGTAACCTTGGATGTGTATAACGCTAGGCTGAAGTCATTTGGTATTCTTGTCAAGGCTCGCAATTTCTTGGTGTTTCAGGGTGATGTGGAATCCATTGCATCCAAAAATCCAAAAGAGCTTACTGCCCTTCTTGAGCAGATATCTGGCTCTGATGAGCTCAGGAGAGACTATGAGCAATTTGAAGAAGAAAAAGCCAGAGCTGAAGAAAAGTCAGCGCTTGTTTATCAGAAGAAGAAGACAGTAGTTATGGAGAGAAAGCAGAAGAAAGAACAAAAGGAAGAAGCAGAGAAACATCTCCGCTTGCAGGACCAACTGAAAACTATAAAGAAAGAGCATTACTTGTGGCAGTTGTTCAATATAGAAAAAGATATTGAAAAGACAACTGATGATCTTGAGGATGAGAGAAAAAGTCGTGAAGGTGTCATGGAAGAACTAGAAAACTTTGAAGCTGAAGCTAGTAAAAAGAAGAAAGAACAGGCAAAGTATCTGAAAGAGATTGCACAATGTGAAAGAAGAACTGCTGAGAGAAGCAACAAACTTGACAAGAATCAACCTGAGCTTCTGAAGTTAAAGGAGGAAATGGCTCGAATTAACTCAAAAATAAAAAAAGGGAAGAAGGAGCTGGATCGGAAAAAAGAGGAGCGGAGAAAACATGCTAATGATATAACAGAGCTACAGAGGGGTATACGAGATCTCACTGCAAAACTAGAAGATCTACAGGAAAAGAGTCGAGATGTTGGTGATGAACTAAAGTTAGATGGCAGTGACTTGGAAGAATATTTTCGAATCAAAGAGGAAGCTGGGATGAAAACTGCAAAGCTTAGAGAAGAGAAAGAGCTTTTGGATAGGCAACAACATGCAGATAGTGAAGCTCAAAAAAATTTGGACGAAAATCTTCAACAGTTAAGGAATAGGGAGTCTGAATTGAATTTACAGGAAGAACAGATGCAAACAAGGCTGAAAAAAATTCTTGATAATTCTACAAAACATAAGGATGACCTTGCAAACTTGAAAAAGGAATTGCGCGTGATGCAGGACAAACATCGAGATTCCAGGAAAAAATATGAACATTTGAAGTTCAGAATTGGTGAAATAGAGAATCAACTACGTGAATTAAAAGCTGATAGATACGAAAATGAGAGAGATGCAAGACTGTCTCAGGCTGTGGAGAGTCTCAAACGTCTGTTTCAAGGAGTTCATGGTCGGATGACTGATCTTTGTAGGCCAACACAGAAGAAGTATAACCTAGCTGTTACTGTTGCTATGGGCAAATTTATGGATGCAGTCGTAGTTGAGGATGAAAAGACTGGAAAGGAATGCATCAAGTACTTGAAAGATCAGAGGCTTCCTCCTCAGACTTTTATTCCTCTGCAATCAGTTCGTGTGAAGCCAATAATTGAAAGATTGCGCACATTGGGTGGTACGGCAAAGCTGTTTGATCCTGACTTGGAGAAGGCAATTCTCTTTGCTGTTGGGAATACTCTTGTTTGTGATGATCTTGAGGAGGCCAAAGTTTTAAGCTGGAGTGGTGAGAGGTTCAAAGTTGTAACTGTGGATGGAATCTTGCTGACAAAGTCTGGCACAATGACGGGTGGCACTAGTGGTGGAATGGAGGCTAGGTCCAAACAGTGGGATGACAAAAAGATTGAAGGGATTAAGAAAAAGAAAGAGCAATATGAATCAGAGTTGGAAGAGGTGGGATCAATAAGAGATATGCACCTTAAGGAGTCTGAAGCATCTGGAAGAATTAGTGGACTAGAGAAGAAAATTCAATATGCTGAGATAGAGAAGCGAAGCATTGAAGACAAACTTTCAAATTTGAGGCGAGAAAAAGAGATAATCAAAGAAGAAATTGAACGTATCAGTCCAGAACTTAAGAAGTTAAATGATGCTGTTAATAAGAGGAATGCAGAAATACGTAAGCTGGAGAAGAGGATCAATGAAATTACTGATCGGATTTACAAAGATTTCAGCAAGTCTGTGGGGGTTGCTAACATCCGTGAGTATGAAGAAAATCAACTCAAGTCTGCTCAAAACCTAGCAGAAGAGAGGCTAAGTTTGAGTAGCCAGCTTTCGAAATTAAAATATCAGTTGGAATATGAACAAAATCGGGATATGACTTCACGAATTAGAGAACTGGAATCTTCTTTAAGTGCTTTAGAGCATGATTTAAAACAGGTGCAGAACAAAGAGGCTGAAGCAAAGTTAGCAGCTGAGAAAGCTACTGAAGATATTGACCGGTTGAAGGAAGAGGCTCAAGAGTGGAAATCAAAGTCAGAAGATTGTGAGAAGGATATCCAAGAATGGAAGAAGCGCGCTTCTTCAGCCACAACAAGCATATCTAAACTTAATCGTCAGATAAACTCAAAGGAGGCACAGATTGAACAATTGATGGTGCGGAAGCAGGAAATATTAGAAAAATGTGAACTAGAACAGATTAGCCTTCCAAGTATATCAGATCCAATGGATACTGGTGCTTCAACACCAGGCCCAGTTTTTGACTTTGATCAGCTAAGTAGGACATTGAAGGATAGGAAGCACTCTGACAGGGACAAAATTGAGGTTGAATTTAAGCAGAAAATGGATGCCATGACATCTGAAATAGAACGAACAGCACCAAATTTGAAGGCATTGGATCAATATGAGGCTCTCCTGGAAAAGGAAAGAAGTGTGACTGAAGAATTTGAAGCTGTCAGGAAAGAGGAGAAGGAGAAGGCTGATAGGTTCAATGCAGTTAAGCAGAAGAGATATGAGATATTCATGGATGCTTTCAACCATATATCTGGTAATATAGATAAAATATACAAACAACTTACTAAGAGCAACACACATCCACTGGGTGGGACAGCGTACTTGAACTTGGAAAATGAAGATGATCCATTTCTTCATGGCATTAAGTACACTGCTATGCCCCCAACAAAACGCTTTCGTGATATGGAACAGCTATCTGGTGGGGAGAAGACTGTTGCTGCCCTTGCATTGCTATTCTCCATCCACAGTTATAAGCCTTCGCCGTTTTTCATATTGGATGAAGTTGATGCTGCATTGGACAACTTAAATGTTGCCAAGGTAGCTGGATTTATTCGTTCGAAATCTTGTGAAGGAGCGAGGGCTAGTCAGGATGCTGATGGTGGCAGTGGTTTTCAAAGTATTGTGATATCCCTAAAAGATAGCTTTTATGACAAAGCTGAAGCATTGGTTGGGGTTTACAGAGACTCCGAGAGAAGCTGTTCGAGAACTCTGACATTTGACCTAACCAAATTCCGGGAGTTCTAA 3636 0.4139 MPSLISPGKIHRLEMENFKSYKGFQVIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLKDLIYAYDDKEKEQKGRRAFVRLVYQLGNGSEIQFARTITSSGGSEYRIDGNLVTLDVYNARLKSFGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELRRDYEQFEEEKARAEEKSALVYQKKKTVVMERKQKKEQKEEAEKHLRLQDQLKTIKKEHYLWQLFNIEKDIEKTTDDLEDERKSREGVMEELENFEAEASKKKKEQAKYLKEIAQCERRTAERSNKLDKNQPELLKLKEEMARINSKIKKGKKELDRKKEERRKHANDITELQRGIRDLTAKLEDLQEKSRDVGDELKLDGSDLEEYFRIKEEAGMKTAKLREEKELLDRQQHADSEAQKNLDENLQQLRNRESELNLQEEQMQTRLKKILDNSTKHKDDLANLKKELRVMQDKHRDSRKKYEHLKFRIGEIENQLRELKADRYENERDARLSQAVESLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDEKTGKECIKYLKDQRLPPQTFIPLQSVRVKPIIERLRTLGGTAKLFDPDLEKAILFAVGNTLVCDDLEEAKVLSWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKKIEGIKKKKEQYESELEEVGSIRDMHLKESEASGRISGLEKKIQYAEIEKRSIEDKLSNLRREKEIIKEEIERISPELKKLNDAVNKRNAEIRKLEKRINEITDRIYKDFSKSVGVANIREYEENQLKSAQNLAEERLSLSSQLSKLKYQLEYEQNRDMTSRIRELESSLSALEHDLKQVQNKEAEAKLAAEKATEDIDRLKEEAQEWKSKSEDCEKDIQEWKKRASSATTSISKLNRQINSKEAQIEQLMVRKQEILEKCELEQISLPSISDPMDTGASTPGPVFDFDQLSRTLKDRKHSDRDKIEVEFKQKMDAMTSEIERTAPNLKALDQYEALLEKERSVTEEFEAVRKEEKEKADRFNAVKQKRYEIFMDAFNHISGNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARASQDADGGSGFQSIVISLKDSFYDKAEALVGVYRDSERSCSRTLTFDLTKFREF 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1996 1211 Coils Coil 703 737 - -
Bisa07g1996 1211 FunFam Structural maintenance of chromosomes 1A 9 224 - -
Bisa07g1996 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 1152 IPR027417 -
Bisa07g1996 1211 Pfam RecF/RecN/SMC N terminal domain 10 1193 IPR003395 -
Bisa07g1996 1211 SMART SMC_hinge_2 517 627 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bisa07g1996 1211 CDD ABC_SMC1_euk 10 157 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Bisa07g1996 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 1202 IPR027417 -
Bisa07g1996 1211 Coils Coil 669 689 - -
Bisa07g1996 1211 PIRSF SMC 8 1207 IPR024704 GO:0005524|GO:0016887
Bisa07g1996 1211 Gene3D - 478 594 - -
Bisa07g1996 1211 Coils Coil 244 292 - -
Bisa07g1996 1211 Coils Coil 307 369 - -
Bisa07g1996 1211 Gene3D - 595 653 - -
Bisa07g1996 1211 Coils Coil 412 502 - -
Bisa07g1996 1211 Gene3D - 940 1210 IPR027417 -
Bisa07g1996 1211 Gene3D - 8 214 IPR027417 -
Bisa07g1996 1211 Coils Coil 823 927 - -
Bisa07g1996 1211 SUPERFAMILY Smc hinge domain 481 676 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bisa07g1996 1211 Coils Coil 1001 1021 - -
Bisa07g1996 1211 Coils Coil 745 772 - -
Bisa07g1996 1211 CDD ABC_SMC1_euk 1090 1205 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Bisa07g1996 1211 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 10 1210 - -
Bisa07g1996 1211 Coils Coil 170 225 - -
Bisa07g1996 1211 Pfam SMC proteins Flexible Hinge Domain 517 625 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1996 Bisa-ChrBisa07 47823197 47837154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1996 8 112 Structural Maintenance of Chromosomes family AT5G61460 34.821 1.72e-08 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1996 07 47823197 47837154 Bisa07g1996 07 47823197 47837154 ECH