Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1987 ATGGATTTTGATTCTTCTCTCTTCCAATACCAAAACATGGAATTGTACCCTGCAAATCCCTGTGAACCATTCTCTTGGGACGAGGAGGACTTCTTCGCCTTCAACTTCAATGACTACTACTCGTCCTCGTCCTCAGTACCCACGAAGGAACAACAGCAACAACAAGAAGAAGAACGACAACAACAAGTATCAATCTCCTCAGAATCCAACAATTCAAGTGCTTGTTGCGTTGAATTTGCGGAAGTATCTTCGGAAGCAGGGAAAGAAGGAAGTGAGAAGAAAGAGATGAGGAGGAAGAGGGGGTACAGAGGAGTGAGAAGGCGGCCATGGGGGAAATTCGCAGCAGAGATAAGAGACTCCACAAGAAAAGGGGTTCGAGTGTGGATCGGAACATTCGAGACGGCAGAGGCAGCGGCTTTAGCCTATGACCAAGCGGCGCTGTGCCTGAAGGGGTCGCAGGCGGTGCTCAATTTCCCAGAGCATGTGGTGAGGGACTCGCTCGAACGAATGCCCACTAAGCCCTGGGAACACGCGTCCTCTCCTGTCCTGGCTCTCAAGAGAAACCACACCTTGAGGGCAAGAAAGTCCAATAAAAAAAACCCCAACAACCTCGCCAATTCGCAGAATCAGAAGAATGTGCTGGTCTTGGAGGATTTGGGCGCTGAATATCTCGACCAACTTCTCTCTTTTACTTCCTCTCAAGTTCTCCCTTTCCTTTAA 720 0.4917 MDFDSSLFQYQNMELYPANPCEPFSWDEEDFFAFNFNDYYSSSSSVPTKEQQQQQEEERQQQVSISSESNNSSACCVEFAEVSSEAGKEGSEKKEMRRKRGYRGVRRRPWGKFAAEIRDSTRKGVRVWIGTFETAEAAALAYDQAALCLKGSQAVLNFPEHVVRDSLERMPTKPWEHASSPVLALKRNHTLRARKSNKKNPNNLANSQNQKNVLVLEDLGAEYLDQLLSFTSSQVLPFL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1987 239 CDD AP2 102 161 IPR001471 GO:0003700|GO:0006355
Bisa07g1987 239 SUPERFAMILY DNA-binding domain 101 160 IPR016177 GO:0003677
Bisa07g1987 239 ProSiteProfiles AP2/ERF domain profile. 101 159 IPR001471 GO:0003700|GO:0006355
Bisa07g1987 239 PANTHER DNA-BINDING DOMAIN 55 229 IPR044808 GO:0003700|GO:0009873
Bisa07g1987 239 Pfam AP2 domain 101 151 IPR001471 GO:0003700|GO:0006355
Bisa07g1987 239 PRINTS Ethylene responsive element binding protein signature 125 141 IPR001471 GO:0003700|GO:0006355
Bisa07g1987 239 PRINTS Ethylene responsive element binding protein signature 102 113 IPR001471 GO:0003700|GO:0006355
Bisa07g1987 239 SMART rav1_2 101 165 IPR001471 GO:0003700|GO:0006355
Bisa07g1987 239 Gene3D AP2/ERF domain 101 161 IPR036955 GO:0003700|GO:0006355
Bisa07g1987 239 FunFam Ethylene-responsive transcription factor 2 100 160 - -
Bisa07g1987 239 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1987 Bisa-ChrBisa07 47689199 47689918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1987 97 228 AP2-EREBP Transcription Factor Family AT3G23240 55.970 5.02e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g1987 AP2 2.6e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0598 03 7718657 7719277 Bisa07g1987 07 47689199 47689918 CCT
Bisa07g1987 07 47689199 47689918 Bisa07g1987 07 47689199 47689918 ECH