Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1986 ATGGAAGGGGAGAGATTTGGTTCGAATGGGAGGGGAAACGGAGGAGAGGCTCGGTACAGAGGGATCCGGCGGCGGCCGTGGGGTAAGTTTGCGGCGGAGATTCGTGACCCCACCAGAAAAGGGACTCGCATTTGGCTCGGAACCTTCGACACCGCGGAGCAGGCTGCTAGGGCTTACGATGCTGCTGCTTTTCATTTCAGGGGACACAGAGCCATTCTCAACTTCCCTAATGAGTACCAGTCTCAGCATACTGCTACGACATCTTCTCTGCCTTTGCCTCTTCAATCTGTTTCTTCTCATTCTGCTTCCTCTGCACTGCCACAAGCCAATGATACGTTGGAGTTTGAATACTTGGATGATAACTTGCTGGACCAGCTCCTTCAATCTCAGCATCACCAGCAGCATAACCTCCCCGACTCATCAACAACATACCACCTATAG 441 0.5238 MEGERFGSNGRGNGGEARYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQSQHTATTSSLPLPLQSVSSHSASSALPQANDTLEFEYLDDNLLDQLLQSQHHQQHNLPDSSTTYHL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1986 146 FunFam Ethylene-responsive transcription factor 2 17 77 - -
Bisa07g1986 146 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Bisa07g1986 146 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Bisa07g1986 146 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Bisa07g1986 146 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Bisa07g1986 146 Pfam AP2 domain 18 69 IPR001471 GO:0003700|GO:0006355
Bisa07g1986 146 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Bisa07g1986 146 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Bisa07g1986 146 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Bisa07g1986 146 PANTHER DNA-BINDING DOMAIN 17 132 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1986 Bisa-ChrBisa07 47642834 47643274 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1986 13 134 AP2-EREBP Transcription Factor Family AT3G23230 52.381 1.56e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g1986 AP2 1.2e-14 CL0081