Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1985 ATGATCCCTAACCACGCCATTCGGAGGATGATTCAAGACTGGTGCGTCAAGCATCGGTCCTACGGGATCGAGAGGATCCCGACGCCGAGAATCCCCGTTGCGCCGTGCGAGGTTTCCGAGACTTGTTCAAGGATCGTCGCCGCGACGCGTAATGGCGACGAGAAGAAGTGCGAGGAATTGGTCGGGAAGATCAGGAATTGGGGGAAAGAGAGCGAGAGGAACAAGAGGTGTATAGTGGAGAACGAGGCTTGTGCTGTGCTAGCCTCTGCCTTTGATTCTTTCTCAATTAGGTCGATTGAGGAAAATGTGGGTGTTCTACAGGAGATCTTAAGGGTGCTTCCATGGATGATGAATGCGCAACAGGAAGAAGCAACAGTAAAATTGGGGTCTAAATCATCTTTAAACTGCTTGATTTGGTTCCTAAATGGGAAAGACCTCTCTGCGAGACAAAATGCAGCCATGGTGCTCAAGGAAATGCCTGTCAGAGCTCTAGCAAAAACTGAAGGTATAATGAGAGAGAAAGAATCACAATCACACAGATTTGTGGAACTGGGTTTGGTTTCTTTATTACTGGATGCTATTGTTGATGCTGAGAGAAGCATATGTGAGAAGGCTTTGGGTGTGTTGGATTGTCTGTGTGATTGTAAAGAAGGGAAGGAAATGGCCATGGCTAATGCTCTGACCTTGCCTCTTGCAATCAAGAAGATTCTGAGGGTATCAGAATTGGCTACAGAGTTTTCAGTCTCCATTCTTTTGAAGCTCTGTGAGAAGGAAGATGAGAGGGTTCTGATTGAAGCAGTTCAAGTGGGGGCTTTTCAGAAGCTTATGGTTATATTGCAGGTGAGTTGTGGAGATAGCACGAAGGAGAAGGTCACTGAGTTGTTGAAACTGTTGAATGCTTATAGAAGCAGAGCAGAGTGTGTTGATTCATCCTTAGAATTCAACTCTGGAAGCTCCATGGAATTCCAACTTGCGAGGGGAATAAGGCCCAAAGCTGCTGCTACTGCTGGCTTTTGTGGTGAATTCCTGAGCTGTGACTTGGGACTTCTTGGCTCCTTTTCTCGGAGAGTTGGGATTTTTCCGAAATTTTGGTATCTAGAGAAGCATCTTTAA 1113 0.4618 MIPNHAIRRMIQDWCVKHRSYGIERIPTPRIPVAPCEVSETCSRIVAATRNGDEKKCEELVGKIRNWGKESERNKRCIVENEACAVLASAFDSFSIRSIEENVGVLQEILRVLPWMMNAQQEEATVKLGSKSSLNCLIWFLNGKDLSARQNAAMVLKEMPVRALAKTEGIMREKESQSHRFVELGLVSLLLDAIVDAERSICEKALGVLDCLCDCKEGKEMAMANALTLPLAIKKILRVSELATEFSVSILLKLCEKEDERVLIEAVQVGAFQKLMVILQVSCGDSTKEKVTELLKLLNAYRSRAECVDSSLEFNSGSSMEFQLARGIRPKAAATAGFCGEFLSCDLGLLGSFSRRVGIFPKFWYLEKHL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1985 370 SUPERFAMILY ARM repeat 43 296 IPR016024 -
Bisa07g1985 370 Gene3D - 39 312 IPR011989 -
Bisa07g1985 370 ProSiteProfiles U-box domain profile. 1 21 IPR003613 GO:0004842|GO:0016567
Bisa07g1985 370 PANTHER WDSAM1 PROTEIN 176 309 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1985 Bisa-ChrBisa07 47592825 47594580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1985 2 314 U-box Gene Family AT5G37490 42.075 1.73e-81 254