Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1983 ATGCCTACAAAGACAATGAAGCTGGTGAAAGAGAAGGAGGAGAATAACTGGAATCAAACAACGCCGTCCACGAATTCATTTTCTTCTTCTCTTTCATCATCGTCGTCAGACGATAATGAGCATGAGGTGACGAAAGGAAATGACCGGTTGAGATCGTCGCTAGGAAGCCAATTTGAATTGATAGAAAACGAGTTCAACGAGAAGAGTTTCAGTCACAAACACTTGCTCAATGGCATCCGAGGCGACTCCAAGGGCTTTGTCATTCATCCCGATAACAGGTGGTATCGGGCATGGGCAACATTCATAATGTTATGGGCAGTATATTCGTCCTTCATTACCTCACTGGAGTTCGGTTTTTTTCGTGGGCTGCCGAGGAATCTCTTTATACTGGACCTCATTGGACAAGTAGCTTTTCTTGTAGACATTGTTTTGCAGTTCTTTGTCGCTTATAGAGACAGTCAGACCTATCGTATGGTCTACAAGCGAACTCCTATTGCTCTGCGCTTTTGTCTACAGGCTTGTGGTAGAAGAGAGGAAGTAAGGTACTTTTTGTGGATCAGATTATACCGGGTGCACAAAGTCATAGATTATTTCCAGCAGATGGAAAAGGATATACGAATCAATTACATGTTTACTAGGATTGTGAAACTTCTAGTAGTTGAGGTGTTCTGCACTCATGTAGCTGCCTGTATATTCTACTATTTGGCTACCACACTACCTCCTTCCCAGGAGGGCTACACATGGATAGGAAGTCTAAAGTTGGGTGACTATAGTTATACAGATTTCAGAAATATTGATTTTTGGAAGCGCTACATAACATCTTTATATTTTTCCGTCGCTACAATGGCTACTGTCGGGTATGGAGATATACATGCTGTTAATACGAGGGAGATGATATTTGTAATGATGTATGTTTCATTTGATATGGTTCTTGGTGCTTATTTGATTGGTAACATCACGGCATTAATAGTCAGAGGATCAAAGACTGAAAAGTTTAGGGAAAAAATGAAGGATCTCATGAAGTATATGAACAGAAACAGACTAGGAAGGGATATCCGTGAACAAATAAAAGGCCATGTGCGCTTACAGTACGAAAGCAGCTATGCTGAGGCAGCTGTTGTTCAAGAACTACCCATTTCTATTCGTGCAAAGATATCCCAGACATTATATTTGCCATACATTGAAAAGGTTTCTCTGTTTAAGGGCTGCTCTTCAGAATTTATCAATCAGATTGTTATTCGGCTCCATGAGGAATTCTTTCTCCCAGGGGAAGTGATAATGGAATGTGGAAATGTTGTAGACCAACTATACTTTGTCTGTCATGGTGTGCTGGAGGAAGTAGGTATAGGTGATGATGGATCTGAAGAGACTGTTTCCCTTCTACAACCTTACAGTTTATTTGGAGAAATCCCTGTTCTTTGTAACATTCCTCAGCCATATAGTGTTCGGGTTTGTGAACTATGTAGGCTTCTACGAATTGATAAACAATCATTCACATATATTCTTGACGTATACTTCTATGATGGGAGAAAAGTTTTAAACAACCTACTTGAGGGAAAAGAATCTATTCGTTATAAGCAATTGGGGTCAGACATCACACTTCATATTGGGAAGCAAGAAGCTGAACTTGCTTTGAAAGTCAATAGTGCAGCTTTTCAAGGGGACCTGTATCAGCTAAAAGGTTTGGTTCGAGCTGGAGCCGATCCCAACAAGACTGATTATGATGGAAGGTCACCCTTGCATCTTGCAGCATCTAGAGGATATGAAGATATCACACATTTCCTTATTCAGGAGGGTGTTGACATCAATATTAGAGATAATTTTGGGAACACACCGTTACTTGAAGCTGTTAAGAATGGACATGATCAAATTGCTTCCTTACTTGTCAGAGAAGGGGCCTCATTGAGGATAGAAAATGCGGGTAGTTTTCTATGTACAGCTGTTGCAATGGGTGATTCAGATTATCTTAAAAGGCTATTATCAAACGGCATGGATCCTAACACAAAAGATTATGATCTCCGAAGCCCTCTTCATGTTGCTGCAGCTGAAGATCTATACTTCCTGGCAAAGTTGCTGTTGGAAGCTGGGGCTAGTGTTTTCACCAAAGACAGATGGGGAAATACCCCACTTGATGAAGCTAGGATGTGTGGAAATAAGAAAATGAGGAAGCTACTAGAAGCAGCAAAGTCTACTCAGTTGTTGGAATTCCCAAATCCTTCCTCAGAATCAGAGAAAATGCACGCAAAGAAATGTACAGTTTTCCCTTTCCACCCGTGGGATCCAAAAGAACATAAATTGTATGGAATTGTACTATGGATTCCACACACCATCGAAGAGCTTATAGAAAGAGCAGCAGAGCAGCTAGAATTTCCCGCTGATTCTTGTATTCTATCAGAAGATGCTGGTTTAATTACTGAAGTGGACATGATTAAGGATGGCCAGAAGCTGTATTTAATCCACAAAACAAAATAG 2472 0.4061 MPTKTMKLVKEKEENNWNQTTPSTNSFSSSLSSSSSDDNEHEVTKGNDRLRSSLGSQFELIENEFNEKSFSHKHLLNGIRGDSKGFVIHPDNRWYRAWATFIMLWAVYSSFITSLEFGFFRGLPRNLFILDLIGQVAFLVDIVLQFFVAYRDSQTYRMVYKRTPIALRFCLQACGRREEVRYFLWIRLYRVHKVIDYFQQMEKDIRINYMFTRIVKLLVVEVFCTHVAACIFYYLATTLPPSQEGYTWIGSLKLGDYSYTDFRNIDFWKRYITSLYFSVATMATVGYGDIHAVNTREMIFVMMYVSFDMVLGAYLIGNITALIVRGSKTEKFREKMKDLMKYMNRNRLGRDIREQIKGHVRLQYESSYAEAAVVQELPISIRAKISQTLYLPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMECGNVVDQLYFVCHGVLEEVGIGDDGSEETVSLLQPYSLFGEIPVLCNIPQPYSVRVCELCRLLRIDKQSFTYILDVYFYDGRKVLNNLLEGKESIRYKQLGSDITLHIGKQEAELALKVNSAAFQGDLYQLKGLVRAGADPNKTDYDGRSPLHLAASRGYEDITHFLIQEGVDINIRDNFGNTPLLEAVKNGHDQIASLLVREGASLRIENAGSFLCTAVAMGDSDYLKRLLSNGMDPNTKDYDLRSPLHVAAAEDLYFLAKLLLEAGASVFTKDRWGNTPLDEARMCGNKKMRKLLEAAKSTQLLEFPNPSSESEKMHAKKCTVFPFHPWDPKEHKLYGIVLWIPHTIEELIERAAEQLEFPADSCILSEDAGLITEVDMIKDGQKLYLIHKTK 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1983 823 PANTHER POTASSIUM CHANNEL AKT1 68 819 IPR045319 GO:0005249|GO:0006813
Bisa07g1983 823 Pfam Cyclic nucleotide-binding domain 419 503 IPR000595 -
Bisa07g1983 823 Gene3D - 533 640 IPR036770 -
Bisa07g1983 823 PRINTS EAG/ELK/ERG potassium channel family signature 315 324 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g1983 823 PRINTS EAG/ELK/ERG potassium channel family signature 271 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g1983 823 PRINTS EAG/ELK/ERG potassium channel family signature 131 141 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa07g1983 823 CDD CAP_ED 399 513 IPR000595 -
Bisa07g1983 823 Gene3D - 95 324 - -
Bisa07g1983 823 MobiDBLite consensus disorder prediction 15 37 - -
Bisa07g1983 823 ProSiteProfiles Ankyrin repeat profile. 672 704 IPR002110 GO:0005515
Bisa07g1983 823 Pfam KHA, dimerisation domain of potassium ion channel 749 818 IPR021789 -
Bisa07g1983 823 ProSiteProfiles Ankyrin repeat region circular profile. 608 639 - -
Bisa07g1983 823 SUPERFAMILY Voltage-gated potassium channels 89 324 - -
Bisa07g1983 823 SMART ANK_2a 608 637 IPR002110 GO:0005515
Bisa07g1983 823 SMART ANK_2a 575 604 IPR002110 GO:0005515
Bisa07g1983 823 SMART ANK_2a 672 701 IPR002110 GO:0005515
Bisa07g1983 823 SMART ANK_2a 705 734 IPR002110 GO:0005515
Bisa07g1983 823 SMART ANK_2a 639 668 IPR002110 GO:0005515
Bisa07g1983 823 Gene3D Helix hairpin bin 326 382 - -
Bisa07g1983 823 ProSiteProfiles cAMP/cGMP binding motif profile. 399 519 IPR000595 -
Bisa07g1983 823 Pfam Ankyrin repeats (3 copies) 550 637 IPR002110 GO:0005515
Bisa07g1983 823 SUPERFAMILY Ankyrin repeat 548 726 IPR036770 -
Bisa07g1983 823 ProSiteProfiles Ankyrin repeat profile. 608 640 IPR002110 GO:0005515
Bisa07g1983 823 ProSiteProfiles Ankyrin repeat region circular profile. 575 607 - -
Bisa07g1983 823 Pfam Ion transport protein 96 324 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa07g1983 823 SUPERFAMILY cAMP-binding domain-like 327 516 IPR018490 -
Bisa07g1983 823 PRINTS Ankyrin repeat signature 688 702 IPR002110 GO:0005515
Bisa07g1983 823 PRINTS Ankyrin repeat signature 576 591 IPR002110 GO:0005515
Bisa07g1983 823 ProSiteProfiles KHA domain profile. 750 823 IPR021789 -
Bisa07g1983 823 ProSiteProfiles Ankyrin repeat profile. 639 671 IPR002110 GO:0005515
Bisa07g1983 823 MobiDBLite consensus disorder prediction 1 46 - -
Bisa07g1983 823 ProSiteProfiles Ankyrin repeat region circular profile. 672 704 - -
Bisa07g1983 823 ProSiteProfiles Ankyrin repeat profile. 575 607 IPR002110 GO:0005515
Bisa07g1983 823 FunFam Potassium channel KAT2 387 524 - -
Bisa07g1983 823 Pfam Ankyrin repeats (many copies) 659 713 IPR002110 GO:0005515
Bisa07g1983 823 Gene3D - 641 733 IPR036770 -
Bisa07g1983 823 SMART cnmp_10 399 517 IPR000595 -
Bisa07g1983 823 Gene3D Jelly Rolls 383 521 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1983 Bisa-ChrBisa07 47558486 47583879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1983 646 725 Ion Channels AT5G37500 33.333 7.64e-07 50.8