Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1981 ATGAAGGGAGGGAGTGATGAGAGAGCGAGCAGGCAAATATGTGAGATGGATCCAAGCATTGGCATGATGAATTGGAGTGGGTGGGAAGAATCATCAGATCATTACTGGGAGATGTGGGAGGAAGAGTACTGTTCAGATCATAAGTTGTTGGAGATTGAGGAGTCAGTGCAGGACCTGGACTGTCTCTCCTTCGACATGGTGACAGATAAGGAAGGTAGGAGGAGGAGGAGTAGTAGTAACAATAGTAAAGAAGAAAAGGCATACATAGGAGTGAGGAGGAGGCCGTGGGGGAAATATGCGGCGGAGATCAGAGACACCACCAGGAACGGGGCTCGGGTGTGGCTGGGAACCTTCGAGAGTGCAGAGGAAGCGGCATTGGCGTACGATCAGGCTGCGTTTTGCATGAGAGGTTCCTCTGCTGTGCTGAATTTTGCGGTGGAAACAGTGAGGCACTCCCTGCAAGGCATGGGCTATGATTCCGCAGCAGGAGGGTGCAGCAGCAGCAGCAGCAGCAGAAGGGGGCCATCCCCTGCGCTGCAGCTCAAGCACAAACACTACATCCACCGCAGGCTCACCGTCAAGCCTCGGAAACACAAGCCCAAGCACCAATCAGACGCTGACGTGGTGGTGCTCCAAGATTTGGGGCCTGACTATCTTGACCACCTTCTCTCCATCTCCCATCCTCATCCAACCCCTCTCTACCTACCTTCCTAA 714 0.5364 MKGGSDERASRQICEMDPSIGMMNWSGWEESSDHYWEMWEEEYCSDHKLLEIEESVQDLDCLSFDMVTDKEGRRRRSSSNNSKEEKAYIGVRRRPWGKYAAEIRDTTRNGARVWLGTFESAEEAALAYDQAAFCMRGSSAVLNFAVETVRHSLQGMGYDSAAGGCSSSSSSRRGPSPALQLKHKHYIHRRLTVKPRKHKPKHQSDADVVVLQDLGPDYLDHLLSISHPHPTPLYLPS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1981 237 PANTHER DNA-BINDING DOMAIN 70 223 IPR044808 GO:0003700|GO:0009873
Bisa07g1981 237 Gene3D AP2/ERF domain 86 147 IPR036955 GO:0003700|GO:0006355
Bisa07g1981 237 SMART rav1_2 87 151 IPR001471 GO:0003700|GO:0006355
Bisa07g1981 237 FunFam Ethylene-responsive transcription factor 2 86 147 - -
Bisa07g1981 237 SUPERFAMILY DNA-binding domain 87 146 IPR016177 GO:0003677
Bisa07g1981 237 CDD AP2 88 146 IPR001471 GO:0003700|GO:0006355
Bisa07g1981 237 ProSiteProfiles AP2/ERF domain profile. 87 145 IPR001471 GO:0003700|GO:0006355
Bisa07g1981 237 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Bisa07g1981 237 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Bisa07g1981 237 Pfam AP2 domain 88 137 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1981 Bisa-ChrBisa07 47539460 47540173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1981 78 231 AP2-EREBP Transcription Factor Family AT3G23240 55.414 1.08e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g1981 AP2 3.1e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1981 07 47539460 47540173 Bisa07g1981 07 47539460 47540173 ECH