Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1972 ATGGCTTCTGGTGGGTCGGGTTCACCCTGCGGGGCATGCAAGTTCCTCCGAAGAAAGTGCGCCACTGACTGCGTCTTCGCCCCCTACTTCTCCTCCGACCAGGGTCCTGCCAGATTTGCAGCCATTCACAAGGTGTTTGGCGCTAGCAACGTCTCCAAGTTGCTCTTGCATTTGCCCGCTCGCGATCGCTGTGAGGCCGTCGTCACTATCACTTACGAAGCCCAGGCTCGCATTCGAGACCCTGTTTATGGCTGCGTCTCTCACATTTTTGCCTTACAACAACAGGTGGCATTCTTGCAGGCTCAACTGATGCAAGTGAGGACTCAACTGGCGCAGAAGAGTGTAATGGAAAGCAGGAACTTTGAAAGCCAGTGGGGAGGGAGTAATGCCGTGGGAGGACAAGCAATGAACGCATACAGTAACATGAGCTCTATATCTCCTCAGAGCTCGCTTGAGTCAGTTGACCACAGCATCAGTGACGCAGGAATCAACAATATTATTCATGATGCACAGAGCAAAGAATTGGATTTCTCATTCCCTAGGAAAAGGTCTTATAACAACGACTTGGGTGAGCTGCAGCAACTTGCTCTCAGGATGATGAGGAACTAG 609 0.514 MASGGSGSPCGACKFLRRKCATDCVFAPYFSSDQGPARFAAIHKVFGASNVSKLLLHLPARDRCEAVVTITYEAQARIRDPVYGCVSHIFALQQQVAFLQAQLMQVRTQLAQKSVMESRNFESQWGGSNAVGGQAMNAYSNMSSISPQSSLESVDHSISDAGINNIIHDAQSKELDFSFPRKRSYNNDLGELQQLALRMMRN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1972 202 Coils Coil 89 109 - -
Bisa07g1972 202 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Bisa07g1972 202 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Bisa07g1972 202 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1972 Bisa-ChrBisa07 47446576 47447438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1972 3 202 AS2 family AT2G42430 52.743 2.16e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa07g1972 LOB 3e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0581 03 7465098 7476711 Bisa07g1972 07 47446576 47447438 CCT