Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1969 ATGGAATTCAGGTACCCAGAAGAGTCCAAGAGCTCCAGCGAAGAAACGGATCGATCGGAGATAAACGATGACACAGGAATGGGGAGATCCTACGAGTGCGTGTTCTGCAAGAGAGGCTTCACTACGGCACAAGCTTTGGGAGGACACATGAATATTCACAGGAAGGATAGAGCCAAAACGAAGCCCAGCTTTGGTGCTTCAAGTTCAATAAGCAAAGTTGACGAGAGTTATGTGAATCTGGGGTTGTACTCCCCAATTCCTAGAGGCGGAGAAGGGATAAGGAATTACTATTCTACTACTCCTGAGGTAGATAGTAGTAATTACCCTCAGATTTATTATCCCAGTACAATCAGATCACCTTCGGAGGTACAGTATACAGATCGGGACGTGTTTGGAGAAGACTGGAGGAGGAGAAGTTTGAGCTTATATAATAATCCATTCTATGTACGTCAAAATGAAGACAAGGTACACACCGCACAAGAGGATGAGCTTGATTTGGAGCTTCGATTGGGATATCAACCATAG 525 0.4476 MEFRYPEESKSSSEETDRSEINDDTGMGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKTKPSFGASSSISKVDESYVNLGLYSPIPRGGEGIRNYYSTTPEVDSSNYPQIYYPSTIRSPSEVQYTDRDVFGEDWRRRSLSLYNNPFYVRQNEDKVHTAQEDELDLELRLGYQP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1969 174 Pfam C2H2-type zinc finger 31 55 - -
Bisa07g1969 174 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
Bisa07g1969 174 PANTHER OS07G0101800 PROTEIN 8 173 - -
Bisa07g1969 174 Gene3D Classic Zinc Finger 7 79 - -
Bisa07g1969 174 MobiDBLite consensus disorder prediction 1 25 - -
Bisa07g1969 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Bisa07g1969 174 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1969 Bisa-ChrBisa07 47435026 47435550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1969 14 174 C2H2 Transcription Factor Family AT4G17810 31.928 8.00e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g1969 zf-C2H2_6 1.5e-05 CL0361