Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1968 ATGGAAGGGAACCATGTGAGAAGAGACAAGCATAGAGAGGAAAACTTGAGCTTTGAGGAGCATACATGGGGAAGCTCGTGGCCTGCGAGAAATTATGGATGTAGCTTTTGCAAGAGAGAGTTTAAGTCAGCTCAAGCTTTGGGTGGTCATATGAACGTTCACAGGAGAGATAGGGCTAGACTCAGATCAGGCACACCCTTATGCCTTCATTCTGAGTCTCCTAAACCTAACCCTACCATAACTAACCCACCTCCTACTCCTAACCCTCCTCTTTTATCTCTTAATTGCCCACCACATCGCTCTTCTCTCACTTTTTCAGCTTCATCTTCTCCCTCTTTGGCTTCAACAGGCGAAGATGGGAAGTCATTGATGCTCATCACATCTTCTTCCAACCTTCCTCTTTTGAGTCCTCAAAGTACGGAAATTAAGATTCATTATGATAACTCAAGGATTGGTTTTGGATCAAGAAATGAGGAATTGCAGGATTGTGCAAAGGAGGAAAGGCTCAAGGGTTTCAAGCAAAAGGAGGATAATAATAGTAATAACAATAATAATATAACGTTGGAGTTGGGGTTAGGGTTGCTTCAACACCCAACGGAGCAGATAGATTTGGAGCTTCGACTCGGCCATCTCTAG 636 0.4371 MEGNHVRRDKHREENLSFEEHTWGSSWPARNYGCSFCKREFKSAQALGGHMNVHRRDRARLRSGTPLCLHSESPKPNPTITNPPPTPNPPLLSLNCPPHRSSLTFSASSSPSLASTGEDGKSLMLITSSSNLPLLSPQSTEIKIHYDNSRIGFGSRNEELQDCAKEERLKGFKQKEDNNSNNNNNITLELGLGLLQHPTEQIDLELRLGHL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1968 211 Gene3D Classic Zinc Finger 7 70 - -
Bisa07g1968 211 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Bisa07g1968 211 PANTHER OS07G0101800 PROTEIN 10 210 - -
Bisa07g1968 211 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Bisa07g1968 211 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
Bisa07g1968 211 MobiDBLite consensus disorder prediction 95 118 - -
Bisa07g1968 211 Pfam C2H2-type zinc finger 32 56 - -
Bisa07g1968 211 MobiDBLite consensus disorder prediction 77 94 - -
Bisa07g1968 211 MobiDBLite consensus disorder prediction 66 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1968 Bisa-ChrBisa07 47424924 47425559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1968 20 209 C2H2 Transcription Factor Family AT3G23130 37.374 6.62e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g1968 zf-C2H2_6 8.5e-07 CL0361