Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1966 ATGTTATATCAAGCATATCTAAATAGTTGTGTTGTTTTGCAGAAACCAGGTGGAATCATTTCTCTGCTTGATGAGGCATGTATGTTTCCAAAGTCAACTCATGAAACATTTGCACAAAAGCTTTATCAGACATTCAAAGATAACAAACGCTTTATCAAGCCAAAATTGTCTCGTTCAGATTTTACCATTGTTCATTATGCTGGGGAGGTTCAGTACCAGTCTGAACAGTTTCTTGACAAAAACAAAGACTATGTTGTCCCTGAACATCAAGACATGCTTAGTTCTTCCAAATGTTCTTTTGTAGCAGACCTTTTCCCTCCACTTTCTGAGGAGACAGCCAAATCTTCGAAGTTTGCTTCTATTGGTGCTCGCTTTAGGCTACAATTACAACAATTGATGGATACGCTGAAATCCACAGATCCCCACTATATTAGATGTTTGAAGCCAAATACTCAATTGAAACCTGCCATATTTGAGAATATGAATGTCATCCAACAACTACGTTGCGGTGGTGTTCTTGAAGCAGTACGAATTAAATGTGCCGGATTTCCAACTCACAAGCCCTTTCATGAATTTTTAACTCGACTGGTTATTCTTGCTCCGGAGGTTCTCAAAGGGAACTTTGATGAGAAGGAAGCATGTAAAAAGATTTTGGAGAAGATTGGCCTCACAGGTTATCAGATAGGGGAAACACAGATATTCTTGAGAGCTGGTCAGATGGCTGAGTTAGATGCTCAAAGGACATGTCTACTTAACAAGTCCGCAACAGTTATCCAGAATCACCATAGAACTCGTAATGCTCAGAAAAGATATGTTGCACTGCAAAAGTCTTCTGTTTGTCTGCAAACGTTTTGTAGAGGAGAAATGGCTCGGAGATCATATTATCACTTGAAGAGGAAGACAGCTGCTGTCAAAATTCAAAAAAGTATGCGTGGAAAACTAGTCAGGAAAAAGTACAAAGAAATAAATATTTCCGTCATTGTGCTGCAGACAGGTTTCCGGGCCATGGCAGCTCATAACGAATTGAGAAATAGAAAGGGAGCTAGTGCATCATTTAAATTTCAGCTTAGGGGGAGAGTTGCAGAAGATAACCAAAAACAGAAGGTTTTTGTGTTTTAG 1119 0.3923 MLYQAYLNSCVVLQKPGGIISLLDEACMFPKSTHETFAQKLYQTFKDNKRFIKPKLSRSDFTIVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSSSKCSFVADLFPPLSEETAKSSKFASIGARFRLQLQQLMDTLKSTDPHYIRCLKPNTQLKPAIFENMNVIQQLRCGGVLEAVRIKCAGFPTHKPFHEFLTRLVILAPEVLKGNFDEKEACKKILEKIGLTGYQIGETQIFLRAGQMAELDAQRTCLLNKSATVIQNHHRTRNAQKRYVALQKSSVCLQTFCRGEMARRSYYHLKRKTAAVKIQKSMRGKLVRKKYKEINISVIVLQTGFRAMAAHNELRNRKGASASFKFQLRGRVAEDNQKQKVFVF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1966 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 299 IPR027417 -
Bisa07g1966 372 Gene3D - 182 249 - -
Bisa07g1966 372 ProSiteProfiles IQ motif profile. 299 326 IPR000048 GO:0005515
Bisa07g1966 372 Gene3D Kinesin motor domain 140 178 IPR036961 -
Bisa07g1966 372 SMART iq_5 273 295 IPR000048 GO:0005515
Bisa07g1966 372 SMART iq_5 250 272 IPR000048 GO:0005515
Bisa07g1966 372 SMART iq_5 298 320 IPR000048 GO:0005515
Bisa07g1966 372 Pfam IQ calmodulin-binding motif 276 294 IPR000048 GO:0005515
Bisa07g1966 372 Pfam IQ calmodulin-binding motif 302 320 IPR000048 GO:0005515
Bisa07g1966 372 Gene3D Myosin VI head, motor domain, U50 subdomain 84 117 - -
Bisa07g1966 372 Gene3D - 301 351 - -
Bisa07g1966 372 Gene3D - 251 300 - -
Bisa07g1966 372 Gene3D - 14 139 - -
Bisa07g1966 372 FunFam unconventional myosin-Va 301 349 - -
Bisa07g1966 372 PANTHER MYOSIN 14 354 - -
Bisa07g1966 372 Pfam Myosin head (motor domain) 14 236 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1966 372 ProSiteProfiles IQ motif profile. 274 303 IPR000048 GO:0005515
Bisa07g1966 372 ProSiteProfiles Myosin motor domain profile. 1 248 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1966 372 SMART MYSc_2a 1 249 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1966 Bisa-ChrBisa07 47361727 47382779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1966 11 359 Myosins gene family AT1G54560 63.037 5.53e-160 485