Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1965 ATGGGTATTCCAGAAAAAATTATTGTTGGTTCTCACATTTGGGTTGGAGATCCAGAACTAGTTTGGATTGATGGAGAAGTACTGAAAATCAATGGAGAAGAAGCTGAGATTCAAACTAGTAACGGGAATACGGTTACTGCCAATTTGTCAAAATTATATCCCAAGGATACAGATGCTCCTGTTGATGGAGTTGATGACATGACCAAGCTTGTATATTTGCATGAGCCAGCGGTTCTTCATAATCTAGCAACTAGATACAGGATGAATGAAATATATACTTACACTGGAAATATTCTTATTGCCATAAATCCCTTTCAAGATCATCCACAATTGTATGACACTGATATGATGAAACGGTACATGGGAGCGACACTGGGAGATTTAAGACCTCATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCAATGATTAATGAGGAGAAAAGCAACTCTATTCTGGTTAGTGGTGAGAGTGGCGCTGGTAAGACAGAAACCACCAAAATGCTCATGCGTTATCTGGCATATTTGGGTGGACGTGCTGCAACTGAAGGACATAGTGTTGAACAACAAGTTTTAGAATCAAACCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTCAGAAATAACAATTCCAGTCGTTTTGGAAAATTTGTTGAGATTCAATTTGACGAGAACGGAAGAATATCTGGCACAGCCATTAGAACTTATCTCTTGGAGAAATCTCGTGTTTGCCAAATCTCAGATCCTGAGCGTAACTATCACTGTTTTTACCTTCTTTGTGCTGCTCCACCTGAGGAAAAGGAAAGATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAATCAATCCAGTTGCTTTGAATTAGATGGTGTTAATGCTACCCAAGACTATCTGAGCACGAAGAAAGCCATGGCTATAGATGCAATTTTCAGAGTTGTGGCTGCTATTCTTCATCTTGGAAACATTAATTTTGAGAAATCAGAAGAAGATACATCAGTTTTAGCAGATGAAGCAGCCAAGTCCCATCTACAAATGGCAGCAGAACTTCTAAAGTGTGATCCAAGTGCTTTGGAAGATGCGCTCTGCAAGCGTATGATGATTACCCCAGAAGAAATTATTAAAAGAAGTCTTGATTCTGATGCTGCAACAGTTAGTAGGGATGGTTTAGCCAAGACATTATATTGTCGACTATTTGACTGGTTAGTCCAAAAAATTAATGTCTCCATTGGGCAGGATCCTAGCTCAAAATGTATCATTGGGGTTCTTGACATATATGGCTTTGAAAGCTTTGTAACTAATAGTTTTGAGCAATTTTGTATTAATTTCACGAATGAAAAGCTACAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATATACACGGGAAGGGATTGATTGGAGCTACTTAGAATTTTTAGATAATCAAGATGTATTGGATCTCATTGAAAAGGTTTTTATCTAG 1479 0.3827 MGIPEKIIVGSHIWVGDPELVWIDGEVLKINGEEAEIQTSNGNTVTANLSKLYPKDTDAPVDGVDDMTKLVYLHEPAVLHNLATRYRMNEIYTYTGNILIAINPFQDHPQLYDTDMMKRYMGATLGDLRPHVFAIAEAAYRAMINEEKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGHSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDENGRISGTAIRTYLLEKSRVCQISDPERNYHCFYLLCAAPPEEKERYKLGDPKSFHYLNQSSCFELDGVNATQDYLSTKKAMAIDAIFRVVAAILHLGNINFEKSEEDTSVLADEAAKSHLQMAAELLKCDPSALEDALCKRMMITPEEIIKRSLDSDAATVSRDGLAKTLYCRLFDWLVQKINVSIGQDPSSKCIIGVLDIYGFESFVTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREGIDWSYLEFLDNQDVLDLIEKVFI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1965 492 SMART MYSc_2a 56 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 Gene3D Myosin VI head, motor domain, U50 subdomain 306 436 - -
Bisa07g1965 492 Gene3D - 437 490 - -
Bisa07g1965 492 Pfam Myosin head (motor domain) 64 489 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 PANTHER MYOSIN 54 489 - -
Bisa07g1965 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 489 IPR027417 -
Bisa07g1965 492 ProSiteProfiles Myosin motor domain profile. 62 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 Pfam Myosin N-terminal SH3-like domain 10 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 Gene3D Kinesin motor domain 12 295 IPR036961 -
Bisa07g1965 492 PRINTS Myosin heavy chain signature 420 448 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 PRINTS Myosin heavy chain signature 473 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa07g1965 492 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1965 Bisa-ChrBisa07 47321059 47341609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1965 1 489 Myosins gene family AT1G08730 76.707 0.0 806