Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1958 ATGGCAGACAAATTTTGTGTGAATGAAGAAGAAAAGGCTATGCTGGAATCTGTATTGGGCGCCCAAGCTGTTGCGTTCTTCATCTCAGCGGTTTCCAATAACGTCTTCTCCGACGTAATTGTTCCATCCGGTGGTGAATTCGGACACCGGCAGAGGTTGGCCCAGATTGTCGAAGTGTCCAAGTGGAACTACGCCGTCTTTTGGCAGGTTGTGGGCTTGAAATCTGGCGGCTCTGCAGTGGTTTGGGGCGATGGGATTTGTCGGGATCTGAATGGGGTTGGCAAGGAGGACGGTGTGAAACGGCGGGTGCTGCAGAAGCTTCATGCCTGCTTTGGTGGCTCAAAAGAGGCTGATTGTGCAAGACTGGATGCGATCTCAGATTTACATATGTTTTACTTAACTTCAAAGTATTATATATTTGGTTTCGACTCCCCATGTGGCCCTGGCAGTTCATTCAAGTCTGGTAAACCAATTTGGGCTTCTGATGCTGCTAGTTGTTTGAATCAATATGAATCAAGATCGTTTCTGGGAAAATTGGCTGGTTTTCAAACAGTTGTTTTGGTACCTCTGAAATCTGGGGTTGTCGAGCTTGGTTCAAAGGAAATGGTGCCTGAAGAGCAGAGTGTTTTGGAGATGGTCAAAACAACATTTGCGGAATCTACTTCTGGACAGGCAAAGGTGTTTCCCAAGATTTTTGAGCGTGAATTAAGCCTCGGGGATACAAAATCTCAGTCCATAACTATTAGTTTCTCCCCCAAAGTGGAAGATGATTCTGGTTTCACATCTGACTCTTATGAAGTACAAGCACTGGGGACGAACCATGTTTTTGGAAATTCTTCTAATGGGAGTATAGGTGACAGTACCGAAGCAAAATTATTCCCACAACTAAATCAAATGATTGGAGGAAATTTCAATGCCCAAGCAAGGGTTTCTTCTTTGGACCTAGGTAATGAAGACTTGTCACCTCATCCAGACGAACGGAAGCCCAGAAAAAGGGGGAGAAAGCCTGCCAATGGTAGAGAGGAACCACTGAATCATGTTGAAGCTGAGAGACAAAGACGTGAGAAGCTTAACCAGAGGTTTTATGCTTTAAGAGCTGTTGTTCCTAACATATCTAAAATGGACAAGGCATCTCTGCTTGGTGATGCCATTACCTATATCACTGATCTGCAGATGAAGATCAAGGTGTTGGAAGCTGAAAAGGGCATGATGAACAATAAGGACTTGCAGTTTCCATTATCAGATATTGATTTTCAGGCTAGACAGGATGATGCAGTAGTTAGAGTGAGCTGCCCGTTGGATACCCATCCTGTTTCTGGGATTGTTAAAACGTTGAGGGAACATCAAATCGTAGCTCAAGAGTCCAGCGTTTCAACTGCAGATGATAAGGTCGTTCATACATTCTCCATAAAAACTCAGGGTGGCGAGGGTGCTGCTGTACAGTTGAAGGAGAAGCTTGAAGCCTCTCTGTTCAAAGATTGA 1482 0.4467 MADKFCVNEEEKAMLESVLGAQAVAFFISAVSNNVFSDVIVPSGGEFGHRQRLAQIVEVSKWNYAVFWQVVGLKSGGSAVVWGDGICRDLNGVGKEDGVKRRVLQKLHACFGGSKEADCARLDAISDLHMFYLTSKYYIFGFDSPCGPGSSFKSGKPIWASDAASCLNQYESRSFLGKLAGFQTVVLVPLKSGVVELGSKEMVPEEQSVLEMVKTTFAESTSGQAKVFPKIFERELSLGDTKSQSITISFSPKVEDDSGFTSDSYEVQALGTNHVFGNSSNGSIGDSTEAKLFPQLNQMIGGNFNAQARVSSLDLGNEDLSPHPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIKVLEAEKGMMNNKDLQFPLSDIDFQARQDDAVVRVSCPLDTHPVSGIVKTLREHQIVAQESSVSTADDKVVHTFSIKTQGGEGAAVQLKEKLEASLFKD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1958 493 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 341 390 IPR011598 GO:0046983
Bisa07g1958 493 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 344 407 IPR036638 GO:0046983
Bisa07g1958 493 Coils Coil 387 407 - -
Bisa07g1958 493 CDD bHLH_AtAIB_like 338 415 - -
Bisa07g1958 493 MobiDBLite consensus disorder prediction 315 352 - -
Bisa07g1958 493 Gene3D - 334 407 IPR036638 GO:0046983
Bisa07g1958 493 PANTHER MYC 50 489 IPR045084 GO:0003700|GO:0006355
Bisa07g1958 493 FunFam Transcription factor bHLH13 334 408 - -
Bisa07g1958 493 Pfam Helix-loop-helix DNA-binding domain 345 391 IPR011598 GO:0046983
Bisa07g1958 493 MobiDBLite consensus disorder prediction 319 352 - -
Bisa07g1958 493 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 50 217 IPR025610 -
Bisa07g1958 493 SMART finulus 347 396 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1958 Bisa-ChrBisa07 47097211 47098692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1958 1 490 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 50.398 1.09e-162 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g1958 bHLH-MYC_N 8.3e-39 CL0161