Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1954 ATGGAAGCCGGTAGATACATCTTTCATAAAAGCCTGTCCTGGACTGATATTAATCACAGGCTCTCTATTCCTTCAGTGGCTTTTTCTGAGCATTTCCCCCCCATCATACATGGGAATAGAGTCAATATTAGGGTTAGATATGGATATAATAACGATGAGCCATGGAGCCTGCCATGCTACATAAGAGGATCTAGTTCTGCTTATGACAAGCCAGTTATATCAGGAGGTTGGCGTCGCTTTGCTGCTGATAAAGGATTTGCTGAGGGCGATGTCCTCATATTCTATAAGGAACGAGATCAACTGGGCTATGTTTATCGTTTCGTAGTAATGAGAGAGGTTGCGGGTGAAATGGGCTTGGTTTAA 363 0.4325 MEAGRYIFHKSLSWTDINHRLSIPSVAFSEHFPPIIHGNRVNIRVRYGYNNDEPWSLPCYIRGSSSAYDKPVISGGWRRFAADKGFAEGDVLIFYKERDQLGYVYRFVVMREVAGEMGLV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1954 120 CDD B3_DNA 7 99 IPR003340 GO:0003677
Bisa07g1954 120 Gene3D - 4 114 IPR015300 -
Bisa07g1954 120 Pfam B3 DNA binding domain 12 99 IPR003340 GO:0003677
Bisa07g1954 120 SUPERFAMILY DNA-binding pseudobarrel domain 5 108 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1954 Bisa-ChrBisa07 47030108 47030470 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1954 2 100 RAV Transcription Factor Family AT3G25730 26.923 2.46e-07 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa07g1954 B3 2.9e-08 CL0405