Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1940 ATGCATCGGACTGATGTTCAATGTAAGAATCGAATCGATACTATTAAGAAGAAGTATAAGATTGAGAAGACTAGGGTTTTTGGCCTAAATGGGGTTCCTTCCACTTGGCTCTTCTTCAATCGCTTGGACATTTTGATTGGGCTCACTTTGAATGCAAAGAAGTCGTTGCCATTGCCTCCGGTGGAGCTTTAGAGCTTTCTATCTATGGCTATTTTGTTCAGCTTCGGCTTCCCCACTTCCCTCCTTCAGGTCGAGGCTCAGTGA 264 0.4432 MHRTDVQCKNRIDTIKKKYKIEKTRVFGLNGVPSTWLFFNRLDILIGLTLNAKKSLPLPPVELXSFLSMAILFSFGFPTSLLQVEAQ 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1940 87 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 51 IPR044823 -
Bisa07g1940 87 Pfam Myb/SANT-like DNA-binding domain 1 43 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1940 Bisa-ChrBisa07 46684779 46687215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1940 3 49 Trihelix Transcription Factor Family AT3G14180 61.702 1.02e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa07g1940 Myb_DNA-bind_4 2.4e-09 CL0123