LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g1934	ATGGAGGAGGTTGAAGAAGCTAACAGAGCAGCTGTTGAAAGCTGTCATAGAGTTCTAAGTTTGTTGTCTCAGCCCAAGGATCATGTTCCTTATACCAACTTAATGGTGGAAACTGGGGAGGCTGTCTCCAGATTCAAGAAAGTTGTTTCCTTGCTCAATAATGGCTTGGGTCATGCGAGAGTCAGGAAGCTCAAGAAACTTCAAACCCCTTTTCCTCGAAGTATCCTTTTAGACAATCCAATTTGTAAAACAAATCATCATCCAAAAAATCTTCTGTCTCTGGAAACTAGCTTTTCTGATAATACAGCTCAGGAATTACGCTCAAACCTTGGAAATTCACTGACTCTTGGAAACCCATCTTTGGAATTGAGCTCAAATGGGAAAAGCCTACTTCAGCCTAACCAACAAGCTTCATCACCACACTATCACCTCCTTCAGCAGCAACAAAGAATGTTGCTACAGCAGCAGCAGATGAAGCACCAAGCAGAAATGATGTTTAGAAGGAACAATAGTGGGATAAATCTGAATTTTGATAGCTCGAGCTGCACACCCACAATGTCATCTACTAGATCTTTCATTTCTTCCTTGAGCGTAGATGGAAGTGTAGCTAACTTGGATGGGAGTGCCTTCCATTTGATAGGAGCTCCACACTCTTCAGATCAGAATTCACAACAACACAAGAGGAGATGCTCTGGCAGAGGAGATGAGGGGAGTGTGAAATGTGGGAGCAGTTCTAGATGCCATTGCTCAAAGAAGAGAAAGCATAGAGTGAAGAGGTCGATCAAGGTGCCTGCTATAAGCAACAAGCTTGCTGATATACCCCCTGATGATTATTCATGGAGGAAATACGGGCAGAAACCAATCAAAGGCTCTCCTCATCCTAGAGGATACTACAAATGCAGCAGCATGAGAGGGTGTCCTGCTAGGAAGCATGTGGAGAGGAGCTTAGAAGACCCATCAATGCTAATTGTGACCTATGAAGGGGAACATAACCACCCTAGAATACCAGCACAATCTGGAAACGCATGA	1029	0.4373	MEEVEEANRAAVESCHRVLSLLSQPKDHVPYTNLMVETGEAVSRFKKVVSLLNNGLGHARVRKLKKLQTPFPRSILLDNPICKTNHHPKNLLSLETSFSDNTAQELRSNLGNSLTLGNPSLELSSNGKSLLQPNQQASSPHYHLLQQQQRMLLQQQQMKHQAEMMFRRNNSGINLNFDSSSCTPTMSSTRSFISSLSVDGSVANLDGSAFHLIGAPHSSDQNSQQHKRRCSGRGDEGSVKCGSSSRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERSLEDPSMLIVTYEGEHNHPRIPAQSGNA	342

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g1934	342	SMART	WRKY_cls	274	334	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1934	342	Gene3D	WRKY domain	259	335	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1934	342	Pfam	WRKY DNA -binding domain	276	333	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1934	342	FunFam	WRKY transcription factor 65	258	335	-	-
	Bisa07g1934	342	ProSiteProfiles	WRKY domain profile.	269	335	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1934	342	Pfam	Plant zinc cluster domain	227	272	IPR018872	-
	Bisa07g1934	342	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	2	338	IPR044810	GO:0003700
	Bisa07g1934	342	MobiDBLite	consensus disorder prediction	215	245	-	-
	Bisa07g1934	342	SUPERFAMILY	WRKY DNA-binding domain	272	334	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g1934	Bisa-ChrBisa07	46603406	46605152	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g1934	1	339	WRKY Transcription Factor Family	AT2G30590	58.311	2.78e-132	380

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa07g1934		WRKY	1e-26	CL0274