Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1931 ATGGCGAATCAGATAGTTAAAGCGAAGAGGGGAGCGATTGCAGCATGCATGACCTGCCCTCTCTGCAAGAAGTTGTTCAGGGAGGCCACCACCATATCTGAATGTCTTCATACGTTTTGCAGGAAGTGCATCTATGATAAAATTACATATGAGGAATTAGAATGCTGTCCAATATGCAATATTGATTTGGGTTGCGTTCCACTTGAGAAATTGAGGCCAGACCACAGTTTGCAAGATGTACGGGCTAAAATTTTCCCGTTGAAGAGAAGAAAGGCAAAAACACCTGAGACACCTGAGGTTGTTCCCTCGGTAACGTTACCAGCCAGAAGAAAGGAGAGATCACTTTCATCTTTGGTTGTCAACACTCCCAGAGTATCAACACAGGCAACCATGACAGGGAGAAGAACAAAACCTACAAGAAAGGCTAGTGGTCTGCGAGCATCTAGTTTTTCTGTTGAAAAGCCTATTAAAAGAGAAGAAGATTTACTGGAAAATCATCCAGAAAAGTCAAGCTCACCTGATACTTCAAACAAGTTTACTCAGAATACTGGACAGAGTTTGTCCCCTCTTGAGGCTAGCCAATCCTTACGTGATAATGAAACAGATAATGTTCCTGAACCATGGGAAGCAAAATTGGATCTTTGGAAACCTTTGAATTGTTTAGTAGAAGTTGCGAGTAGGAGTAAATCGTTCAAGTCTAATGTGCAAGTGTCTGATGCTAAACTGGAAACCATGCACATAAAAGAGAGTGACACTCAAGTGCAAAAATCCAAAAATAAGGAAAATAAACGCAAGGCAAAAGTTGAGGATGAAAAAGTTGACTCTGATCCTGTCTCTTTGGATACAGCAAAACCTAATAAGTTGCGCAAAGTTCGCCGGAAAAAGGAACCTCTTTCTGGGGAATCAGGCATATCACCTCAAGTTGTGCTGGATGCCACCAGTGCTAAATTAAAACAGAGAACTGGTCCAATTTGGTTCTCCTTAGTAGCTTCGGAAGACCAGGAAGGAAATACAGCCTTGCCCCAAATTCCTGCAAATTATGTAAGAATAAAGGATGGAAATGTACCTGTCTCATTTATCCAAAAATACCTGATGAAGAAACTAGATCTGACGAGTGAAGCAGAGGTTGAGATTAAATGCATGGGGCAACCAGTGGTCCCTACGCTGCAATTATATAGTTTGGTTGAGTTGTGGCTGCAAACCGCATCCACAGCACAGCGAATTCCTGCAACCATAGGGTCCTCGGCGAAGGATTTCATTATGGTCCTAGCCTATGCTCGCAAGGTCCCACATCCTTGA 1299 0.4265 MANQIVKAKRGAIAACMTCPLCKKLFREATTISECLHTFCRKCIYDKITYEELECCPICNIDLGCVPLEKLRPDHSLQDVRAKIFPLKRRKAKTPETPEVVPSVTLPARRKERSLSSLVVNTPRVSTQATMTGRRTKPTRKASGLRASSFSVEKPIKREEDLLENHPEKSSSPDTSNKFTQNTGQSLSPLEASQSLRDNETDNVPEPWEAKLDLWKPLNCLVEVASRSKSFKSNVQVSDAKLETMHIKESDTQVQKSKNKENKRKAKVEDEKVDSDPVSLDTAKPNKLRKVRRKKEPLSGESGISPQVVLDATSAKLKQRTGPIWFSLVASEDQEGNTALPQIPANYVRIKDGNVPVSFIQKYLMKKLDLTSEAEVEIKCMGQPVVPTLQLYSLVELWLQTASTAQRIPATIGSSAKDFIMVLAYARKVPHP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1931 432 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Bisa07g1931 432 MobiDBLite consensus disorder prediction 246 302 - -
Bisa07g1931 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 104 IPR013083 -
Bisa07g1931 432 SUPERFAMILY RING/U-box 15 83 - -
Bisa07g1931 432 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 428 IPR044807 GO:0004842
Bisa07g1931 432 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Bisa07g1931 432 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Bisa07g1931 432 MobiDBLite consensus disorder prediction 152 168 - -
Bisa07g1931 432 SMART ring_2 19 59 IPR001841 -
Bisa07g1931 432 MobiDBLite consensus disorder prediction 246 286 - -
Bisa07g1931 432 CDD RING-HC_PCGF 17 60 - -
Bisa07g1931 432 MobiDBLite consensus disorder prediction 115 146 - -
Bisa07g1931 432 MobiDBLite consensus disorder prediction 169 201 - -
Bisa07g1931 432 MobiDBLite consensus disorder prediction 112 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1931 Bisa-ChrBisa07 46564923 46571415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1931 2 351 C3H Transcription Factor Family AT2G30580 52.841 8.85e-114 335