Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1925 ATGGAAGTAATTGGCGTGAAGCAGCAGAACATGGGATTTGAGGAAACGGAGCTGAGGCTTGGAATTGGGCAGCCTCGAAATGGAGGCGAAGGAGGAGAAGCCGTGAGGAAGAGAGGATTTTCTGAGACCCAGACTGATGATGACAACAATAGCTCTGTGGATTTGAAGCTCAATCTCTCATCTTCCAAGGAAGCATCAGATCTAGCTCACCAGCCCAAGGAGAAGACCCTTCTCCCTTCAGATCCTGCCAAGCCTCCTGCCAAGGCGCAAGTGGTGGGATGGCCACCGGTGCGATCGTTCCGGAAGAACATGCTGGCAGTGCAGAAGAAGAAGGGAGAGGAGAGCGATCAGAAAAGCAGCCCTAATGGAAATGGAAATGGAAGCTTCGTGAAGGTGAGCATGGATGGAGCTCCTTATCTCCGCAAAGTGGACCTCACCATGTACAAGACTTACCAAGAACTCTCTGATGCCTTAGCCAACATGTTCAGCTCCTTCAGTACCATAGGGAATTGTGGATCCCAAGGATTGAAGTATTTCATGAACGAGAGTAAGCTTATGGATCTGCTGAATGGCTCCGACTATGTCCCAACCTATGAAGACAGGGATGGCGACTGGATGCTTGTCGGTGATGTCCCTTGGGAGATGTTTGTTGAATCATGCAAGCGATTGCGCATTATGAAAGGAAAGGAGGCTATTGGACTTGCTCCAAGAGCCATGGAGAAATGCAAGAACCGAAGCTAG 741 0.498 MEVIGVKQQNMGFEETELRLGIGQPRNGGEGGEAVRKRGFSETQTDDDNNSSVDLKLNLSSSKEASDLAHQPKEKTLLPSDPAKPPAKAQVVGWPPVRSFRKNMLAVQKKKGEESDQKSSPNGNGNGSFVKVSMDGAPYLRKVDLTMYKTYQELSDALANMFSSFSTIGNCGSQGLKYFMNESKLMDLLNGSDYVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1925 246 MobiDBLite consensus disorder prediction 106 130 - -
Bisa07g1925 246 ProSiteProfiles PB1 domain profile. 127 228 IPR000270 GO:0005515
Bisa07g1925 246 MobiDBLite consensus disorder prediction 45 66 - -
Bisa07g1925 246 FunFam Auxin-responsive protein 122 238 - -
Bisa07g1925 246 Pfam AUX/IAA family 34 237 IPR033389 -
Bisa07g1925 246 Gene3D - 122 240 - -
Bisa07g1925 246 MobiDBLite consensus disorder prediction 16 94 - -
Bisa07g1925 246 SUPERFAMILY CAD & PB1 domains 119 227 - -
Bisa07g1925 246 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 233 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1925 Bisa-ChrBisa07 46495625 46498444 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1925 128 231 B3 DNA Binding Superfamily AT3G61830 33.654 3.43e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa07g1925 AUX_IAA 1.2e-81 CL0072